Author

Tsion Abay

Gladstone InstitutesORCID 0009-0009-0024-2732Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:differential expression· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

Ansuman T. SatpathyiD· 2 shared Caleb A. LareauiD· 2 shared Leif S. LudwigiD· 2 shared Robert R. StickelsiD· 2 shared Yu-Hsin HsiehiD· 2 shared Al OzonoffiD· 1 shared Anne-Sophie Gribling-BurreriD· 1 shared Anshul Bharat KundajeiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersGenomics

Ansuman T. SatpathyORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintAug 30, 2026

A Low Containment CCHFV Entry Screening Platform Identifies Compounds with Antiviral Activity against Authentic CCHFV

Nallely Espinoza, Sophie N. Spector, Jessica R. Harmon…·Pardis Christine Sabeti

This study identifies eltrombopag olamine and quercetin as CCHFV entry inhibitors using a BSL-2 pseudotype screening platform validated against authentic CCHFV under BSL-4 conditions.

DOI 10.64898/2026.08.28.747751

deep learningexperimental assay

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GenomicsbioRxivPreprintMar 27, 2024

Transcript-specific enrichment enables profiling rare cell states via scRNA-seq

Tsion Abay, Robert R. Stickels, Meril T. Takizawa…·Caleb A. Lareau

This paper introduces PERFF-seq, a method to profile rare cell states via scRNA-seq by enriching for specific RNA transcripts, demonstrating its application in immune and brain tissues.

2 citations

humanscRNA-seq

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GeneticsbioRxivPreprintApr 23, 2023

Codon affinity in mitochondrial DNA shapes evolutionary and somatic fitness

Caleb A. Lareau, Yajie Yin, Jacob C. Gutierrez…·Ansuman T. Satpathy

The paper identifies a synonymous mtDNA variant that affects codon-anticodon affinity and shows its impact on cellular fitness in immune cells.

5 citations

humanbulk RNA-seq

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