Author

Aria J. Fasse

California Institute of TechnologyORCID 0009-0009-2894-9908Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Alexis Camacho-Avila· 1 shared Dylan L. SchaffiD· 1 shared Ilya GrabylnikoviD· 1 shared Marianne E. Bronner-FraseriD· 1 shared Michael L. PiacentinoiD· 1 shared Phoebe E. WhiteiD· 1 shared Robert Vander VeldeiD· 1 shared Sydney M. ShafferiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 12 mutual co-author links

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1 shared paperDevelopmental Biology

Alexis Camacho-Avila

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2 papers

Recent·Most cited

Systems BiologyCell SystemsPeer-reviewedFeb 23, 2024

Clonal differences underlie variable responses to sequential and prolonged treatment

Dylan L. Schaff, Aria J. Fasse, Phoebe E. White…·Sydney M. Shaffer

This study tracks resistant cancer clones through treatment using single-cell RNA-sequencing and barcoding, showing clones have distinct fates and gene expression states that predict survival.

14 citations

humanscRNA-seq

𝕏 PostBluesky

Developmental BiologybioRxivPreprintAug 10, 2023

Sphingolipid metabolism is spatially regulated in the developing embryo by SOXE genes

Michael L. Piacentino, Aria J. Fasse, Alexis Camacho-Avila…·Marianne E. Bronner-Fraser

The paper identifies enhancer regions regulating SMPD3 expression in neural crest cells during EMT and shows SoxE transcription factors control this expression.

DOI 10.1101/2023.08.10.552770

mousebulk RNA-seq

𝕏 PostBluesky