Author

Christine L. O’Connor

University of MinnesotaORCID 0009-0009-3516-4260Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Assay:CRISPR screen· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:plant (other)· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Alex B. BrohammeriD· 1 shared Angela LekiD· 1 shared Candice N. HirschiD· 1 shared Jean‐Michel MichnoiD· 1 shared Jiangxingzi XuiD· 1 shared Justin CoheniD· 1 shared Kaiyue MaiD· 1 shared Katherine E. KoczwaraiD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Alex B. BrohammerORCID

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2 papers

Recent·Most cited

GeneticsbioRxivPreprintJul 12, 2023

Deep Mutational Scanning in Disease-related Genes with Saturation Mutagenesis-Reinforced Functional Assays (SMuRF)

Kaiyue Ma, Shushu Huang, Kenneth K.H. Ng…·Monkol Lek

This paper introduces SMuRF, a framework for deep mutational scanning in disease-related genes, generating functional scores for all coding variants and aiding in variant interpretation.

3 citations

humanCRISPR screen

𝕏 PostBluesky

BioinformaticsBMC GenomicsPeer-reviewedApr 7, 2020

Using multiple reference genomes to identify and resolve annotation inconsistencies

Patrick J. Monnahan, Jean‐Michel Michno, Christine L. O’Connor…·Candice N. Hirsch

The paper identifies and resolves split-gene misannotations across multiple maize reference genomes using RNAseq data and a simulation framework.

20 citations

plant (other)bulk RNA-seq

𝕏 PostBluesky