Author

Benjamin J. Daniel

The University of Texas at San Antonio Health Science CenterORCID 0009-0009-4161-9591Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:plant (other)· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Ian H. CheesemaniD· 2 shared Shalini NairiD· 2 shared Simon G. TrevinoiD· 2 shared Standwell C. NkhomaiD· 2 shared Stanley Khoswe· 2 shared Aliou DiaiD· 1 shared Catherine JettiD· 1 shared Dianne Janette TerlouwiD· 1 shared

Activity by Year

2017-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersGenetics

Ian H. CheesemanORCID

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2 papers

Recent·Most cited

GeneticsbioRxivPreprintAug 13, 2018

Resolving within-host malaria parasite diversity using single-cell sequencing

Standwell C. Nkhoma, Simon G. Trevino, Karla M. Gorena…·Ian H. Cheeseman

This study uses single-cell sequencing to analyze within-host diversity of Plasmodium falciparum in malaria patients, revealing up to seventeen unique lineages per patient and suggesting co-transmission from a single mosquito is more common than superinfection.

13 citations

humanscRNA-seq

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GenomicsGenome Biology and EvolutionPeer-reviewedDec 1, 2017

High-resolution single-cell sequencing of malaria parasites

Simon G. Trevino, Standwell C. Nkhoma, Shalini Nair…·Ian H. Cheeseman

This paper develops a single-cell genomics protocol to reconstruct haplotypes of Plasmodium falciparum parasites and analyzes 48 cells from a malaria infection to estimate clonality and haplotype relatedness.

38 citationstop 4%

plant (other)whole-genome sequencing

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