Author

Sergei A. Kazakov

ORCID 0009-0009-9700-0245Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:fungi (other)· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Aidan C. ManningiD· 2 shared Jonathan M. HowardiD· 2 shared Sergio Barberán-SoleriD· 2 shared Clarissa J. NobileiD· 1 shared Rachel C. Clark· 1 shared Rachel C. HarbeitneriD· 1 shared Tahirah WilliamsiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

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7 top collaborators · 18 mutual co-author links

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2 shared papersMolecular Biology

Aidan C. ManningORCID

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2 papers

Recent·Most cited

Molecular BiologyRNAPeer-reviewedApr 2, 2026

A method of comprehensive sequencing analysis of the small RNA fragmentome (RiboMarker)

Rachel C. Harbeitner, Aidan C. Manning, Jonathan M. Howard…·Sergei A. Kazakov

The paper introduces RiboMarker, a method for comprehensive sRNA sequencing that detects all RNA fragment types, improving sensitivity for low-abundance biomarkers.

DOI 10.1261/rna.080861.125

long-read sequencingproteomics

𝕏 PostBluesky

Molecular BiologybioRxivPreprintFeb 11, 2025

Characterization of transcriptomic changes across Coccidioides morphologies using RiboMarker(R)-enhanced RNA sequencing

Jonathan M. Howard, Aidan C. Manning, Rachel C. Clark…·Sergio Barberán-Soler

This study characterizes transcriptomic changes in Coccidioides posadasii across different morphologies using RiboMarker-enhanced RNA sequencing, revealing small RNA and fragment expression patterns associated with life stage transitions.

DOI 10.1101/2025.02.11.634332

fungi (other)bulk RNA-seq

𝕏 PostBluesky