A homogenization approach for spatial cytokine distributions in immune-cell communication
Lisa Shi Yun LiiD, Lorena PohliD, Andreas HutloffiD, Barbara NiethammeriD, Kevin ThurleyiD
Abstract
Cytokine-mediated communication is a central mechanism by which immune cells coordinate activation, differentiation and proliferation. While mechanistic reaction-diffusion models provide detailed descriptions of cytokine secretion and uptake at the cellular scale, their computational cost limits their applicability to large and densely packed cell populations. Previously employed approximations of cytokine diffusion fields rely on assumptions that neglect the influence of cellular geometry and volume exclusion. In this work, we study a macroscopic description of cytokine diffusion and reaction dynamics based on homogenization techniques, rigorously linking microscopic reaction-diffusion formulations to effective continuum models. The resulting homogenized equations replace discrete responder cells with a continuous density, while retaining essential features of cellular uptake and excluded-volume effects. Further, we show that in regimes with approximate radial symmetry, classical Yukawa-type solutions emerge as limiting cases of the homogenized model, provided appropriate correction factors are included. Overall, our approach allows efficient multiscale modeling of cytokine signaling in complex immune-cell environments.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Diffusion-limited cytokine signaling in T cell populations
Patrick Brunner, Lukas Kiwitz, … Kevin Thurley·iSciencePeer-reviewed·May 30, 2024
- Spatio-temporal modeling reveals a layer of tunable control circuits for the distribution of cytokines in tissues
Patrick Brunner, Lukas Kiwitz, Kevin Thurley·bioRxiv·Mar 17, 2022
- Response-Time Behaviors Of Intercellular Communication Network Motifs
K. Thurley, L. F. Wu, S. J. Altschuler·bioRxiv·Aug 23, 2017
- Development of muti-agent-simulation models for intercellular communication via cytokines and extracellular matrices
Ken-ichi Inoue, Satoko Kishimoto, … Masanori Hariyama·bioRxiv·Sep 21, 2022
- The Spread of Interferon-γ in Melanomas is Highly Spatially Confined, Driving Non-Genetic Variability in Tumor Cells
Edoardo Centofanti, Chad Wang, … Jennifer E. Oyler·Proceedings of the National Academy of SciencesPeer-reviewed·Aug 21, 2023
- Continuum descriptions of spatial spreading for heterogeneous cell populations: theory and experiment
O. Matsiaka, R. Baker, M. J. Simpson·Journal of Theoretical BiologyPeer-reviewed·Dec 1, 2019