bioRxivMolecular BiologyPreprint
CircPLXNA2 affects the proliferation and apoptosis of myoblast through circPLXNA2/gga-miR-12207-5P/MDM4 axis
Xu DongiD, Jiabao XingiD, Qingchun LiuiD, Mao YeiD, Zhen ZhouiD, Yantao LiiD, Zhenhui LiiD, Qinghua NieiD
Abstract
BackgroundcircRNAs are new-identified special endogenous RNA molecules that covalently close a loop by backsplicing with pre-mRNA. In the cytoplasm, circRNAs would act as molecular sponges to bind with specific miRNA to promote the expression of target genes. However, there is still in its fancy of knowing circRNA functional alternation in skeletal myogenesis. In this study, we favor a model to identify the circRNA-miRNA-mRNA interaction network in which the axis may be implicated in the progression of chicken primary myoblasts (CPMs) myogenesis by a combination of multi-omics (i.e., circRNA-seq and ribo-seq). ResultsIn total, 314 circRNA-miRNA-mRNA regulatory axis containing 66 circRNAs, 70 miRNAs, and 24 mRNAs that may be relevant to myogenesis were collected. With these, the circPLXNA2-gga-miR-12207-5P-MDM4 axis aroused our research interest. The circPLXNA2 is highly differentially expressed during differentiation versus proliferation. It was demonstrated that circPLXNA2 inhibited the process of apoptosis while at the same time stimulating cell proliferation. Furthermore, we demonstrated that circPLXNA2 could inhibit the repression of gga-miR-12207-5p to MDM4 by directing binding to gga-miR-12207-5p, thereby restoring MDM4 expression. ConclusionsCircPLXNA2 could function as a competing endogenous RNA (ceRNA) to inhibit the repression of gga-miR-12207-5p to MDM4 by directing binding to gga-miR-12207-5p, thereby recovering the expression of MDM4.
- assay: long-read sequencing
- assay: bulk RNA-seq
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: statistical model
- Citations
- 2
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Circular RNA Pde4dip regulates myogenesis by interacting with Zfp143 mRNA: A novel regulatory axis
Suman Singh, Arundhati Das, … Amaresh Chandra Panda·RNA BiologyPeer-reviewed·Oct 31, 2025
- Circular Smad1-Encoded Polypeptide Regulates Myogenesis
Tanvi Sinha, Swarnava Dutta, … Amaresh Chandra Panda·bioRxiv·Feb 27, 2026
- Circular RNA profiling in the oocyte and cumulus cells reveals that circARMC4 is essential for porcine oocyte maturation
Zubing Cao, Di Gao, … Yunhai Zhang·AgingPeer-reviewed·Sep 28, 2019
- CircFOXK2 Promotes Tumor Growth and Metastasis of Pancreatic Ductal Adenocarcinoma via Complexing with RNA Binding Proteins and Sponging MiR-942
C. H. Wong, U. K. Lou, … Y. Chen·bioRxiv·Oct 3, 2019
- CircRNA_012164/MicroRNA-9-5p axis mediates cardiac fibrosis in diabetic cardiomyopathy
H. Wang, E. Z. R. Wang, … S. Chakrabarti·bioRxiv·Apr 15, 2024
- NRMLncR, a myocyte-enriched long non-coding RNA, enhances myogenesis in mouse
Yufen Li, Yumei Zhou, … Feng Yue·bioRxiv·Feb 14, 2026