Cell Reports MethodsNeurosciencePeer-reviewed journal article
Visual detection of seizures in mice using supervised machine learning
Gautam S. SabnisiD, Leinani E. HessioniD, J. Matthew MahoneyiD, Arie Sitthichai MobleyiD, Marina dos Santos, Brian Q. GeutheriD, Vivek KumariD
Abstract
1Seizures are caused by abnormally synchronous brain activity that can result in changes in muscle tone, such as twitching, stiffness, limpness, or rhythmic jerking. These behavioral manifestations are clear on visual inspection and the most widely used seizure scoring systems in preclinical models, such as the Racine scale in rodents, use these behavioral patterns in semiquantitative seizure intensity scores. However, visual inspection is time-consuming, low-throughput, and partially subjective, and there is a need for rigorously quantitative approaches that are scalable. In this study, we used supervised machine learning approaches to develop automated classifiers to predict seizure severity directly from noninvasive video data. Using the PTZ-induced seizure model in mice, we trained video-only classifiers to predict ictal events, combined these events to predict an univariate seizure intensity for a recording session, as well as time-varying seizure intensity scores. Our results show, for the first time, that seizure events and overall intensity can be rigorously quantified directly from overhead video of mice in a standard open field using supervised approaches. These results enable high-throughput, noninvasive, and standardized seizure scoring for downstream applications such as neurogenetics and therapeutic discovery.
- Citations
- 10
- FWCI
- 6.06
- Field percentile
- top 3%
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