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GenomicsbioRxiv
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Disentangling multivariate relationships between cognition, language and social traits: structures of G, E, and rGE

Fenja SchlagiD, Lucía de HoyosiD, Ellen VerhoefiD, Alexander KlassmanniD, Simone van den BedemiD, Simon E. FisheriD, Brad VerhulstiD, Beaté St PourcainiD

Abstract

BackgroundCognitive, language, and social abilities are complex, heritable and intertwined traits shaping childrens development and later mental health. To better understand cross-trait interrelationships, we model here the structures of shared genomic and shared non-genomic/residual (i.e. broadly environmental) influences, and their correlation (rGE), investigating cognitive, language, and social behavioural/communication measures. MethodsData were obtained for unrelated children (8-13 years) from two population-based cohorts: the UK Avon Longitudinal Study of Parents and Children (ALSPAC, N[≤]6,543) and the US Adolescent Brain Cognitive DevelopmentSM (ABCD) Study (N[≤]4,412), and analyses were carried out implementing an extended data-driven genetic-relationship-matrix structural equation modelling (GRM-SEM) approach. ResultsIn ALSPAC, we identified two independent phenotypic domains, each captured by a structurally matching pair consisting of a genomic (A) and a non-genomic/residual (E) factor. The first domain reflected cognitive/language difficulties, with the largest genomic and residual factor loadings ({lambda}A and {lambda}E, respectively) for verbal IQ ({lambda}A=0.73(SE=0.05); {lambda}E=0.57(SE=0.07)). The second domain captured social difficulties, with the largest {lambda}A and {lambda}E for social communication measures ({lambda}A=0.39(SE=0.10); {lambda}E=0.82(SE=0.10)). We identified trait-specific rGE between pairs of A and E factors with different directions of effect (cognition/language rGE=0.89(SE=0.18), social rGE=-0.62(SE=0.17)). rGE patterns were linked to increased measurable A and E contributions for cognition/language difficulties, but decreased contributions for social problems. Analyses in ABCD confirmed the two domains for E and phenotypic structures, although genomic contributions were low. ConclusionsIn childhood, cognitive/language abilities versus social abilities are influenced by distinct genomic and/or environmental factors, potentially interlinked through trait-specific rGE, suggesting differences in developmental processes.

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02 /Specification & Classification

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