bioRxivEvolutionary Biology
Individual-based modeling of genome evolution in haplodiploid organisms
Abstract
Ants, bees, wasps, bark beetles, and other species have haploid males and diploid females. Although such haplodiploid species play key ecological roles and are threatened by environmental changes, no general framework exists for simulating their genetic evolution. Here, we use the SLiM simulation environment to build a novel model for individual-based forward simulation of genetic evolution in haplodiploid populations. We compare the fates of adaptive and deleterious mutations and find that selection is more effective in haplodiploid species than in diploid species. Our open-source model will help understand the evolution of sociality and how ecologically important species may adapt to changing environments.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Faster-haplodiploid evolution under divergence-with-gene-flow: simulations and empirical data from pine-feeding hymenopterans
E. Bendall, R. Bagley, … V. C. Sousa·bioRxiv·Apr 9, 2021
- Haplodiploidy alone does not predict the evolution of eusociality
Sachin Suresh, Timothy A. Linksvayer·Current BiologyPeer-reviewed·Aug 1, 2026
- SLiM 3: Forward genetic simulations beyond the Wright-Fisher model
B. C. Haller, P. W. Messer·bioRxiv·Sep 15, 2018
- SLiM 5: Eco-evolutionary simulations across multiple chromosomes and full genomes
Benjamin C. Haller, Peter L. Ralph, Philipp W. Messer·Molecular Biology and EvolutionPeer-reviewed·Nov 25, 2025
- Conflict between heterozygote advantage and hybrid incompatibility in haplodiploids (and sex chromosomes)
A.-H. Ghenu, A. Blanckaert, … C. Bank·bioRxiv·Dec 22, 2017
- Population genetics meets ecology: a guide to individual-based simulations in continuous landscapes
Elizabeth T. Chevy, Jiseon Min, … Peter L. Ralph·Ecology and EvolutionPeer-reviewed·Apr 1, 2025