Hepatology CommunicationsMolecular BiologyPeer-reviewed journal article
Integrated hepatic ferroptosis gene signature dictates pathogenic features of ferroptosis
Takashi MatsumotoiD, Akihiro NitaiD, Yohei KanamoriiD, Ayato MaedaiD, Tomomi Nita, Noriko Yasuda‐YoshiharaiD, Kosuke MimaiD, Hirohisa OkabeiD, Katsunori ImaiiD, Hiromitsu HayashiiD, Yuta MatsuokaiD, Katsuya NagaokaiD, Keiichi I. NakayamaiD, Yuki SugiuraiD, Yasuhito TanakaiD, Hideo BabaiD, Toshiro MoroishiiD
Abstract
Background & AimsFerroptosis, a distinctive form of cell death induced by iron-dependent lipid peroxidation, is implicated in various biological processes, including liver diseases. Establishing an iron overload-induced ferroptosis model and identifying hepatic gene signatures associated with ferroptosis are crucial for understanding its role in liver pathogenesis. MethodsF-box and leucine-rich repeat protein 5 (FBXL5) is a substrate-recognition component of the SCF E3 ligase complex that restricts intracellular iron levels. In this study, we used liver-specific Fbxl5-null mice to establish an iron overload-induced ferroptosis model. Transcriptome analysis identified genes involved in hepatic ferroptosis. Integrating these gene signatures with another ferroptosis model enabled the assessment of ferroptosis-related pathology in murine liver injury models and in 174 patients undergoing liver resection surgery. ResultsIron overload induced severe liver damage in liver-specific Fbxl5-null mice, characterized by elevated liver enzymes, histopathological changes, and lipid peroxidation. Transcriptome analysis revealed a distinct set of genes associated with hepatic ferroptosis response. Generating a gene signature for evaluating ferroptosis enhanced the understanding of ferroptosis-related pathologies in liver diseases. Iron overload exacerbated liver damage in murine ischemia-reperfusion injury models via ferroptosis induction. In human patients, elevated serum iron levels correlated with sustained post-operative liver damage, indicating heightened susceptibility to ferroptosis. ConclusionHere, a murine model of iron overload-induced hepatic ferroptosis was established, and a gene signature indicative of hepatic ferroptosis response in both mice and humans was identified. These findings underscore the role of ferroptosis in liver injury progression and suggest potential therapeutic targets for liver disease intervention. HIGHLIGHTSO_LILiver-specific Fbxl5 knockout mice provide an iron-induced ferroptotic injury model C_LIO_LIIntegrated gene signature of iron- and acetaminophen-induced liver injury dictates ferroptosis C_LIO_LIIron overload aggravates hepatic ischemia-reperfusion injury in mice C_LIO_LIPatients with high iron levels show delayed post-operative liver damage recovery C_LI IMPACT AND IMPLICATIONSOur study elucidated the critical role of iron in liver disease pathogenesis and ischemia-reperfusion injury (IRI). By establishing a murine model of iron overload-induced ferroptosis, we confirmed that iron overload exacerbated hepatic IRI, underscoring the importance of ferroptosis in liver damage. Additionally, the development of an integrated gene signature for hepatic ferroptosis response provides a valuable tool for evaluating ferroptosis in liver diseases. Via analysis of patient data, we also highlighted the clinical relevance of ferroptosis in post-operative liver damage, offering insights into potential therapeutic strategies targeting iron and ferroptosis to improve outcomes in patients with liver diseases.
- organism: mouse
- organism: human
- assay: bulk RNA-seq
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: statistical model
- Citations
- 8
- FWCI
- 5.22
- Field percentile
- top 4%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Differences in Hepatocellular Iron Metabolism Underlie Sexual Dimorphism in Hepatocyte Ferroptosis
- Oxysterol-sensing by Liver X receptor counteracts ferroptosis via lipid remodeling
Andrea Kolak, Juliane Tschuck, … Kamyar Hadian·bioRxiv·Aug 20, 2026
- Oxidoreductases generate hydrogen peroxide that drives iron-dependent lipid peroxidation during ferroptosis
- Modelling ferroptosis in a human microglial line by sequential exposure to iron and GPX4 inhibition
Renaud Bussiere, Nikhil Kumar Tulsian, … Sébastien Gillotin·Oxidative Medicine and Cellular LongevityPeer-reviewed·Jan 1, 2026
- Transcriptomic Enrichment of Ferroptosis-Related Gene ACSL4 in Advanced Hepatic Fibrosis/Cirrhosis: Bioinformatics Analysis and Experimental validation
Shuya Zhang, Ying Liu, … Jun Huang·bioRxiv·Jun 22, 2023
- Mouse models of hereditary hemochromatosis do not develop early liver fibrosis in response to a high fat diet
K. Pantopoulos, J. Wagner, … H. Vali·bioRxiv·May 10, 2018