Communications BiologyMolecular BiologyPeer-reviewed journal article
cryoTIGER: Deep-Learning Based Tilt Interpolation Generator for Enhanced Reconstruction in Cryo Electron Tomography
Tomáš MajtneriD, Jan Philipp KreysingiD, Maarten W. TuijteliD, Sergio Cruz-LeóniD, Jiasui LiuiD, Gerhard HummeriD, Martin BeckiD, Beata TuroňováiD
Abstract
Cryo-electron tomography enables the visualization of macromolecular complexes within native cellular environments, but is limited by incomplete angular sampling and the maximal electron dose that biological specimen can be exposed to. Here, we developed cryoTIGER (Tilt Interpolation Generator for Enhanced Reconstruction), a computational workflow leveraging a deep learning-based frame interpolation to generate intermediate tilt images. By interpolating between tilt series projections, cryoTIGER improves angular sampling, leading to enhanced 3D reconstructions, more refined particle localization, and improved segmentation of cellular structures. We evaluated our interpolation workflow on diverse datasets and compared its performance against non-interpolated data. Our results demonstrate that deep learning-based interpolation improves image quality and structural recovery. The presented cryoTIGER framework offers a computational alternative to denser sampling during tilt series acquisition, paving the way for enhanced cryo-ET workflows and advancing structural biology research.
- Citations
- 16
- FWCI
- 5.74
- Field percentile
- top 3%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Icecream: High-Fidelity Equivariant Cryo-Electron Tomography
Vinith Kishore, Valentin Debarnot, … Ivan Dokmanić·bioRxiv·Oct 17, 2025
- Beam image-shift accelerated data acquisition for near-atomic resolution single-particle cryo-electron tomography
J. Bouvette, H.-F. Liu, … A. Bartesaghi·bioRxiv·Sep 24, 2020
- Optimising the tilt-increment for in situ cryo-electron tomography
Maarten W. Tuijtel, Tomáš Majtner, … Martin Beck·bioRxiv·Aug 20, 2025
- Isotropic Reconstruction of Electron Tomograms with Deep Learning
Y.-T. Liu, H. Zhang, … Z. H. Zhou·bioRxiv·Jul 17, 2021
- Rapid Synthesis of Cryo-ET Data for Training Deep Learning Models
C. Purnell, J. Heebner, … M. T. Swulius·bioRxiv·Apr 28, 2023
- Diffusion Probabilistic Models for Missing-Wedge Correction in Cryo-Electron Tomography
Nadeer Hasan, Aurélie Bertin, Slavica Jonić·bioRxiv·Feb 17, 2026