Modeling the Co-existence of NMDAR-Dependent and AMPAR-Regulated Long-Term Potentiation/Depression
Berke Ozgur Arslan, İsmail AktürkiD, Neslihan Serap ŞengöriD, Onur AlptürkiD
Abstract
In this work, we develop a mathematical model that captures both the early and late phases of Long-Term Potentiation (LTP) and Long-Term Depression (LTD) within an NMDAR-dependent and AMPA-regulated framework. The model combines multiple essential properties. First, it emphasizes a detailed representation of biochemical processes within the postsynaptic neuron, thereby illustrating the interaction between LTD and distinct forms of LTP. Second, the dynamic modulation of postsynaptic AMPA receptor conductance is represented through nonlinear differential equations and algebraic relations. Third, the model incorporates input specificity, associativity, and cooperativity, allowing synaptic changes at one site to influence the strength of neighboring synapses. These features provide a comprehensive description of synaptic dynamics, allowing the simulation of plasticity at both the cellular and the network levels. Overall, the model offers a valuable framework for studying NMDAR-dependent LTP and LTD by explicitly incorporating AMPA currents. We believe that this model provides deeper insights into the molecular mechanisms of synaptic plasticity and paves the way for the construction of network-level models by linking multiple cells through AMPA receptor conductance.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Specific nanoscale synaptic reshuffling and control of short-term plasticity following NMDAR- and P2XR-dependent Long-Term Depression
Benjamin Compans, Magalie Martineau, … Eric Hosy·bioRxiv·Sep 8, 2019
- Competition for glutamate between NMDA and AMPA receptors prevents runaway synaptic dynamics
G. Qingchen·bioRxiv·Apr 10, 2020
- Spatiotemporal modeling reveals geometric dependence of AMPAR dynamics on dendritic spine morphology
Miriam K. Bell, Christopher T. Lee, Padmini Rangamani·The Journal of PhysiologyPeer-reviewed·Nov 3, 2022
- The biophysical basis underlying the maintenance of early phase long-term potentiation
Moritz Becker, Christian Tetzlaff·PLoS Computational BiologyPeer-reviewed·Mar 22, 2021
- Dendritic spine neck plasticity controls synaptic expression of long-term potentiation
Rahul Gupta, Cian O’Donnell·bioRxiv·Jan 27, 2023
- A unified computational model for cortical post-synaptic plasticity
Tuomo Mäki‐Marttunen, Nicolangelo L. Iannella, … Kim T. Blackwell·eLifePeer-reviewed·Jul 30, 2020