bioRxivBioengineering
Using a micro-device with a deformable ceiling to probe stiffness heterogeneities within 3D cell aggregates
S. Jain, H. Belkadi, A. Michaut, S. Sart, J. Gros, M. Genet, C. N. Baroud
Abstract
Recent advances in the field of mechanobiology have led to the development of methods to characterize single-cell or monolayer mechanical properties and link them to their functional behaviour. However, there remains a strong need to establish this link for three-dimensional multicellular aggregates, which better mimic tissue function. Here we present a platform to actuate and observe many such aggregates within one deformable micro-device. The platform consists of a single PDMS piece cast on a 3D-printed mold and bonded to a glass slide or coverslip. It consists of a chamber containing cell spheroids, which is adjacent to air cavities that are fluidically independent. Controlling the air pressure in these air cavities leads to a vertical displacement of the chambers ceiling. The device can be used in static or dynamic modes over time-scales of seconds to hours, with displacement amplitudes from a few m to several tens of microns. Further, we show how the compression protocols can be used to obtain measurements of stiffness heterogeneities within individual co-culture spheroids, by comparing image correlations of spheroids at different levels of compression with finite element simulations. The labeling of the cells and their cytoskeleton is combined with image correlation methods to relate the structure of the co-culture spheroid with its mechanical properties at different locations. The device is compatible with various microscopy techniques, including confocal microscopy, which can be used to observe the displacements and rearrangements of single cells and neighborhoods within the aggregate. The complete experimental and imaging platform can now be used to provide multi-scale measurements that link single-cell behavior with the global mechanical response of the aggregates.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Multimodal microscale mechanical mapping of cancer cells in complex microenvironments
M. Nikolic, G. Scarcelli, K. Tanner·bioRxiv·Mar 28, 2022
- Contributions of single-cell mechanics and cell-cell adhesion to multicellular spheroid mechanics
David Dolgitzer, Eleana Parajón, … Pablo A. Iglesias·bioRxiv·Aug 9, 2026
- Interacting active surfaces: a model for three-dimensional cell aggregates
A. Torres-Sanchez, M. K. Winter, G. Salbreux·bioRxiv·Mar 21, 2022
- Mapping cellular-scale internal stiffness in 3D tissues with smart material hydrogel probes
S. Mok, S. Al Habyan, … C. Moraes·bioRxiv·Nov 15, 2019
- Estimating anisotropy of single cells using a compliant biaxial stretcher
Himanshu Marwah, Hetarth Bhatt, … Sreenath Balakrishnan·bioRxiv·Jun 27, 2025
- Heterogeneity in environmental stiffness alone can guide cells and shape tissues
Mathis Grelier, Carlos Ureña Martín, … Mark Schvartzman·bioRxiv·Oct 10, 2025