bioRxivCancer BiologyPreprint
The oncofetal protein IMP1 regulates the transcriptomic landscape to drive early events in pancreatic cancer progression and growth
Orçun Haçarız, Julia Messina‐PachecoiD, Elliot GoodfellowiD, Matthew LeibovitchiD, Andrew M. LowyiD, Stéphanie PerrinoiD, Bertrand J. Jean‐ClaudeiD, Zu‐Hua GaoiD, Alex GregorieffiD, Pnina BrodtiD
Abstract
Background & AimsPancreatic ductal adenocarcinoma (PDAC) has a dismal 5-year survival rate of 12% - the lowest of all malignancies. This is partially due to late diagnosis, as early stages of the disease, including the process of acinar to ductal metaplasia (ADM) are not presently detectable. Insulin-like growth factor 2 mRNA binding protein (IMP)1 is an oncofetal protein implicated in cancer progression. Here, we aimed to determine its role in the early stages of PDAC development and in the maintenance of the malignant phenotype. MethodsIMP1 expression was analyzed in surgical PDAC specimens and in pancreatic tissue derived from KPC mice. Murine ductal organoids expressing the KrasG12D mutant were treated with the IMP1 inhibitor BTYNB and RNAseq performed. The function of IMP1 targets was analyzed in an ADM model and the effect of IMP1 silencing on the growth of PDAC cells was evaluated in vivo. ResultsWe found high expression of IMP1 in precancerous lesions of human and murine PDAC, but not in the normal pancreas. Blockade of IMP1 function impeded murine ADM and ductal organoid growth and profoundly altered the transcriptional landscape of the organoids, reducing the expression of cytokine-cytokine receptor interactors, cell adhesion and cell invasion mediators such as Card11, Gkn3, Il13ra2, Mmp9, and Vcam1. Gastrokine-3 and IL-13 in turn, enhanced the ADM process. Finally, IMP1 silencing in PDAC cells inhibited their metastatic outgrowth in mice. ConclusionsIMP1 is a master regulator of early events in PDAC progression and a potential biomarker and target for this disease.
- organism: mouse
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: experimental assay
- Citations
- 1
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Bone Morphogenetic Protein (BMP) signaling upregulates expression of ID1 and ID3 in pancreatitis and pancreatic ductal adenocarcinoma
M. K. Raghunathan, K. M. Scully, … P. Itkin-Ansari·bioRxiv·Sep 1, 2023
- Integrative analysis of genomic and transcriptomic data informs precancer progression in the pancreas
Kathleen Noller, Jiaying Lai, … Elana Judith Fertig·bioRxiv·Nov 3, 2025
- E2F transcription factors promote tumorigenicity in pancreatic ductal adenocarcinoma
L. Bertonnier-Brouty, J. Andersson, … I. Artner·bioRxiv·Nov 10, 2023
- Loss of p53 tumor suppression function drives invasion and genomic instability in models of murine pancreatic cancer
C. Tonelli, A. Deschenes, … D. A. Tuveson·bioRxiv·Dec 31, 2021
- Mutant GNAS drives a pyloric metaplasia with tumor suppressive glycans in intraductal papillary mucinous neoplasia
V. Q.-H. Trinh, K. E. Ankenbauer, … K. E. DelGiorno·bioRxiv·Feb 25, 2024
- TSPAN1 promotes human pancreatic cancer cells proliferation by modulating CDK1 via Akt
Xin Wang, Xiaozhuo Gao, … Gang Shi·bioRxiv·May 29, 2020