Sign in
BioinformaticsJournal of Physical and Chemical Reference Data
Peer-reviewed journal article

High-quality thermodynamic data on the stability changes of proteins upon single-site mutations

Fabrizio PucciiD, Raphaël BourgeasiD, Marianne Rooman

Abstract

We have set up and manually curated a dataset containing experimental information on the impact of amino acid substitutions in a protein on its thermal stability. It consists of a repository of experimentally measured melting temperatures (Tm) and their changes upon point mutations ({Delta}Tm) for proteins having a well-resolved X-ray structure. This high-quality dataset is designed for being used for the training or benchmarking of in silico thermal stability prediction methods. It also reports other experimentally measured thermodynamic quantities when available, i.e. the folding enthalpy ({Delta}H) and heat capacity ({Delta}CP) of the wild type proteins and their changes upon mutations ({Delta}{Delta}H and {Delta}{Delta}CP), as well as the change in folding free energy ({Delta}{Delta}G) at a reference temperature. These data are analyzed in view of improving our insights into the correlation between thermal and thermodynamic stabilities, the asymmetry between the number of stabilizing and destabilizing mutations, and the difference in stabilization potential of thermostable versus mesostable proteins.

PDFDOI

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISPucci '16Nisthal '19Dieckhaus '24Pucci '16Frenz '20Wei '26
83% semantic matchBioinformatics
Fabrizio Pucci, Raphaël Bourgeas, Marianne Rooman·Scientific Reports·Mar 18, 2016