Importance of linear combination modeling for quantification of Glutathione and GABA levels using Hadamard-edited MRS
Y. Song, H. J. Zollner, S. C. N. Hui, G. Oeltzschner, J. J. Prisciandaro, R. A. E. Edden
Abstract
PurposeTwo main approaches are used for spectral analysis of edited data: simple peak fitting and linear combination modeling (LCM) with a simulated basis set. Recent consensus recommended LCM as the method of choice for the spectral analysis of edited data. The aim of this study is to compare the performance of simple peak fitting and LCM in a test-retest dataset, hypothesizing that the more sophisticated LCM approach will improve quantification of HERMES data compared with simple peak fitting. MethodsA test-retest dataset was re-analyzed using Gannet (simple peak fitting) and Osprey (LCM). These data were obtained from the dorsal anterior cingulate cortex of twelve healthy volunteers, with TE 80 ms for HERMES and TE 120 ms for MEGA-PRESS of glutathione (GSH). Within-subject coefficients of variance (CVs) were calculated to quantify between-scan reproducibility of each metabolite estimate. ResultsThe reproducibility of HERMES GSH estimates was substantially improved using LCM compared to simple peak fitting, from a CV of 19.0% to 9.9%. For MEGA-PRESS data, the GSH reproducibility was similar using LCM and simple peak fitting, with CVs of 7.3% and 8.8% respectively. ConclusionLinear combination modeling with simulated basis functions substantially improves the reproducibility of GSH quantification for HERMES data.
02 /Specification & Classification
Click any tag to browse matching papers- Organism
- Assay
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Comparison of linear combination modeling strategies for GABA-edited MRS at 3T
H. J. Zöllner, S. Tapper, … G. Oeltzschner·bioRxiv·May 26, 2021
- Impact of acquisition and modeling parameters on test-retest reproducibility of edited GABA+
Kathleen E. Hupfeld, Helge J. Zöllner, … Richard A.E. Edden·NMR in BiomedicinePeer-reviewed·Dec 13, 2023
- Linewidth-related bias in modelled concentration estimates from GABA-edited 1H-MRS
Alexander R. Craven, Tiffany Bell, … Georg Oeltzschner·bioRxiv·Feb 27, 2024
- Test-retest reliability of multi-metabolite edited MRS at 3T using PRESS and sLASER
Jessica Archibald, Amy E. Bouchard, … Mark E. Mikkelsen·Magnetic Resonance in MedicinePeer-reviewed·Oct 28, 2025
- Comparison of seven modelling algorithms for GABA-edited 1H-MRS
Alexander R. Craven, Pallab K. Bhattacharyya, … Georg Oeltzschner·NMR in BiomedicinePeer-reviewed·Jan 25, 2022
- Participant-specific macromolecule information improves quantification of GABA-edited spectra at 3T
Justin R. Singer, Kimberly L. Chan·bioRxiv·Oct 14, 2026