A physical model of cell metabolism
Abstract
Cell metabolism is characterized by three fundamental energy demands to sustain cell maintenance, to trigger aerobic fermentation and to achieve maximum metabolic rate. Here we report a physical model of cell metabolism that explains the origin of these three energy scales. Our key hypothesis is that the maintenance energy demand is rooted on the energy expended by molecular motors to fluidize the cytoplasm and counteract molecular crowding. Using this model and independent parameter estimates we make predictions for the three energy scales that are in quantitative agreement with experimental values. The model also recapitulates the dependencies of cell growth with extracellular osmolarity and temperature. This theory brings together biophysics and cell biology in a tractable model that can be applied to understand key principles of cell metabolism.
02 /Specification & Classification
Click any tag to browse matching papers- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Metabolic scaling in small life forms
Mark E. Ritchie, Christopher P. Kempes·bioRxiv·Dec 20, 2023
- Metabolic fluctuations explain allometric scaling diversity
Andrea Tabi, Wout Merbis, … Ricard V. Solé·bioRxiv·Nov 6, 2025
- A modular model integrating metabolism, growth, and cell cycle predicts that fermentation is required to modulate cell size in yeast populations
Marco Vanoni, Pasquale J Palumbo, … Lilia Alberghina·PLoS Computational BiologyPeer-reviewed·Jul 21, 2025
- From cells to organism - how natural selection causes metabolic scaling
Peter F. Pelz·bioRxiv·Jul 24, 2025
- Cell Geometry and Membrane Protein Crowding Constrain Growth Rate, Overflow Metabolism, Respiration, and Maintenance Energy.
Ross P. Carlson, Tomáš Gedeon, … Ashley E. Beck·FEBS LettersPeer-reviewed·Jun 24, 2026
- Impact of life origins on metabolism
Alexei Vázquez·bioRxiv·Jun 7, 2024