Frontiers in NeuroscienceNeurosciencePeer-reviewed journal article
Comparing adult hippocampal neurogenesis across species: translating time to predict the tempo in humans
Abstract
Comparison of neurodevelopmental sequences between species whose initial period of brain organization may vary from one hundred days to one thousand days, and whose progress is intrinsically nonlinear presents large challenges in normalization. Comparing adult timelines when lifespans stretch from one year to seventy-five, when underlying cellular mechanisms under scrutiny do not scale similarly, presents challenges to simple detection and comparison. The question of adult hippocampal neurogenesis has generated numerous controversies regarding its simple presence or absence in humans versus rodents, whether it is best described as the tail of a distribution centered on early neural development, or is several distinct processes. In addition, adult neurogenesis may have substantially changed in evolutionary time in different taxonomic groups. Here we extend and adapt a model of the cross-species transformation of early neurodevelopmental events which presently reaches up to the equivalent of the third human postnatal year for 18 mammalian species (www.translatingtime.net) to address questions relevant to hippocampal neurogenesis, which permit extending the database to adolescence or perhaps to the whole lifespan. We acquired quantitative data delimiting the envelope of hippocampal neurogenesis from cell cycle markers (i.e., Ki67, DCX) and RNA sequencing data for two primates (macaque, humans) and two rodents (rat, mouse). To improve species coverage in primates, we gathered the same data from marmosets (Callithrix jacchus), but additionally gathered data on a number of developmental milestones to find equivalent developmental time points between marmosets and other species. When all species are so modeled, and represented in a common time frame, the envelopes of hippocampal neurogenesis are essentially superimposable. Early developmental events involving the olfactory and limbic system start and conclude possibly slightly early in primates than rodents, and we find a comparable early conclusion of primate hippocampal neurogenesis (as assessed by the relative number of Ki67 cells) suggesting a plateau to low levels at approximately 2 years of age in humans. Marmosets show equivalent patterns within neurodevelopment, but unlike macaque and humans may have wholesale delay in the initiation of neurodevelopment processes previously observed in some precocial mammals such as the guinea pig and multiple large ungulates.
- organism: human
- organism: mouse
- organism: rat
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: clustering
- research focus: dimensionality reduction
- approach: statistical model
- Citations
- 69
- FWCI
- 2.85
- Field percentile
- top 6%
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