bioRxivPhysiologyPreprint
Fluorometric intracellular Na+ measurement as compared with flame emission assay: An unexpected problem with gramicidin-based calibration
V. E. Yurinskaya, N. D. Aksenov, A. V. Moshkov, T. S. Goryachaya, A. A. Vereninov
Abstract
Fluorescent probes are a popular and indispensable tool for monitoring sodium concentration in living cells in situ. Calibration of fluorescent probes inside cells commonly uses ionophores to equilibrate intracellular and external ion concentrations. Here we test this calibration method using in parallel classical flame emission assay. Suspension human lymphoma cells allow both flow cytometry fluorometric study and flame emission assay. The most sensitive Na+ fluorescent probe ANG-2 and the most common ionophores were tested. Cellular Na+ was altered for calibration in three different ways: by stopping the sodium pump with ouabain, by inducing of apoptosis with staurosporine, and by gramicidin or amphotericin B treatment. We found that ANG-2 fluorescence in cells treated with gramicidin or amphotericin was about two fold lower than in the cells with the same sodium concentration but without ionophores. The equal fluorescence measured in the absence and in the presence of ionophores corresponds to different cell sodium concentrations. No effect of gramicidin on hydrolyzed ANG was observed in vitro. The mechanism, by which gramicidin decreases ANG fluorescence in cells is unlikely to be physical quenching and remains obscure. We conclude that ANG fluorescence does not display realistic cell Na+ if fluorescence in cell is measured in ionophore absence while calibrated in its presence.
- organism: human
- assay: flow cytometry
- assay: fluorescence / live-cell microscopy
- research focus: cell type annotation
- research focus: differential expression
- research focus: cell signaling & trafficking
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Comparison of cellular Na+ assays by flow fluorometry with ANG-2 and flame emission: Pitfalls in using ionophores for calibrating fluorescent probes
V. Yurinskaya, N. Aksenov, … A. A. Vereninov·bioRxiv·Jan 13, 2020
- Fluorescent anionic cyanine plasma membrane probes for live cell and in vivo imaging
Dmytro I. Danylchuk, Igor Khalin, … Andrey S. Klymchenko·Analytical ChemistryPeer-reviewed·Apr 12, 2025
- A general strategy to develop cell permeable and fluorogenic probes for multi-colour nanoscopy
L. WANG, M. Tran, … K. Johnsson·bioRxiv·Jul 2, 2019
- Quantitative Determination of Protein Concentration in Living Cells
N. Brinkenfeldt, A. Dias, … K. L. Martinez·bioRxiv·May 31, 2023
- Overcoming efflux of fluorescent probes for actin imaging in living cells
R. Gerasimaite, J. Seikowski, … G. Lukinavicius·bioRxiv·Feb 17, 2020
- Rapid microfluidic perfusion system enables controlling dynamics of intracellular pH regulated by Na+/H+ exchanger NHE1
Quang D. Tran, Yann Bouret, … Céline Cohen·Lab on a ChipPeer-reviewed·Jan 1, 2025