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The Journal of Open Source SoftwareBioinformaticsPeer-reviewed journal article

A framework for generating interactive reports for cancer genome analysis

Ai OkadaiD, Kenichi ChibaiD, Hiroko TanakaiD, Satoru MiyanoiD, Yuichi ShiraishiiD

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Abstract

SummaryWe introduce paplot, the software for generating dynamic reports that are frequently necessary in the post analytical phases of cancer genome studies. The \"interactive\" nature of the paplot-generated reports enables users to extract much richer information than that obtained from static graphs via most conventional visualization tools.\n\nAvailability and implementationThe python implementation for paplot (MIT license) is available at https://github.com/Genomon-Project/paplot. The documentation is at http://paplot-doc.readthedocs.io/en/latest/.\n\nContactyshira@hgc.jp

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