Circulation Genomic and Precision MedicineGenetic & Genomic MedicinePeer-reviewed journal article
A polygenic risk score for coronary heart disease performs well in individuals aged 70 years and older
Johannes T. Neumann, Moeen RiaziD, Andrew BakshiiD, Galina PolekhinaiD, Le T. P. Thao, Mark R. Nelson, Robyn L. WoodsiD, Gad AbrahamiD, Michael InouyeiD, Christopher Michael ReidiD, Andrew M. Tonkin, John McNeil, Paul A LacazeiD
Abstract
BackgroundThe use of a polygenic risk score (PRS) to predict coronary heart disease (CHD) events has been demonstrated in the general adult population. However, whether predictive performance extends to older individuals is unclear. AimTo evaluate the predictive value of a PRS for incident CHD events in a prospective cohort of individuals aged 70 years and older. MethodsWe used data from 12,792 genotyped participants of the ASPREE trial, a randomized placebo-controlled trial investigating the effect of daily 100mg aspirin on disability-free survival in healthy older people. Participants had no previous history of diagnosed atherothrombotic cardiovascular events, dementia, or persistent physical disability at enrolment. We calculated a PRS comprising 1.7 million genetic variants (metaGRS). The primary outcome was a composite of incident myocardial infarction or CHD death over 5 years. ResultsAt baseline, the median population age was 73.9 years and 54.9% were female. In total, 254 incident CHD events occurred. When the PRS was added to conventional risk factors, it was independently associated with CHD (hazard ratio 1.24 [95% confidence interval [CI] 1.08-1.42], p=0.002). The AUC of the conventional model was 70.53 (95%CI 67.00-74.06), and after inclusion of the PRS increased to 71.78 (95%CI 68.32-75.24, p=0.019), demonstrating improved prediction. Reclassification was also improved, as the continuous net reclassification index after adding PRS to the conventional model was 0.25 (95%CI 0.15-0.28). ConclusionsA PRS for CHD performs well in older people, suggesting that the clinical utility of genomic risk prediction for CHD extends to this distinct high-risk subgroup.
- organism: human
- assay: whole-genome sequencing
- research focus: variant effect prediction
- approach: statistical model
- Citations
- 24
- FWCI
- 2.54
- Field percentile
- top 9%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Genomic prediction of coronary heart disease
Gad Abraham, Aki S Havulinna, … Michael Inouye·European Heart JournalPeer-reviewed·Sep 21, 2016
- Differential prediction performance between Caribbean- and Mainland-subgroups using state-of-the-art polygenic risk scores for coronary heart disease: Findings from the Hispanic Community Health Study/Study of Latinos (HCHS/SOL)
Christina G. Hutten, Frederick J. Boehm, … Maria Argos·medRxiv·Sep 25, 2024
- Polygenic and clinical risk scores and their impact on age at onset of cardiometabolic diseases and common cancers
Nina Mars, Jukka T. Koskela, … Samuli Ripatti·bioRxiv·Oct 30, 2019
- Association of polygenic risk scores for coronary artery disease with subsequent events amongst established cases
Laurence J Howe, Frank Dudbridge, … Riyaz S. Patel·Human Molecular GeneticsPeer-reviewed·Mar 24, 2020
- Comparative Performance of Polygenic Risk Scores for Atherosclerotic Cardiovascular Disease Subtypes in the All of Us Research Program
Johanna L. Smith, Kristján Norland, … Iftikhar J. Kullo·medRxiv·Nov 5, 2024
- Polygenic Risk Score Associates with Atherosclerotic Plaque Characteristics at Autopsy
Anne Cornelissen, Neel V. Gadhoke, … Aloke Virmani Finn·Arteriosclerosis Thrombosis and Vascular BiologyPeer-reviewed·Nov 2, 2023