bioRxivMicrobiologyPreprint
Characterization of three Yarrowia lipolytica strains in respect to different cultivation temperatures and metabolite secretion
S. Hackenschmidt, F. Bracharz, R. Daniel, A. Thuermer, S. Bruder, J. Kabisch
Abstract
Despite the increasing relevance, ranging from academic research to industrial applications, only a limited number of nonconventional, oleaginous Yarrowia lipolytica strains are characterized in detail. Therefore, we analyzed three strains in regard to their metabolic and physiological properties and in respect to important characteristics of a production strains. A flow cytometry method was set up to evaluate their fitness in a rapid manner. By investigating different cultivation conditions and media compositions, similarities and differences between the distinct strain backgrounds could be derived. Especially sugar alcohol production, as well as a agglomeration of cells were found to be connected with growth at high temperatures. In addition, sugar alcohol production was independent of high substrate concentrations under these conditions. To investigate particular traits, including growth characteristics and metabolite concentrations, genomic analysis were performed. We found sequence variations for one third of the annotated proteins but no obvious link to all phenotypic features.
- organism: yeast
- assay: proteomics
- research focus: cell type annotation
- research focus: differential expression
- research focus: variant calling
- approach: experimental assay
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