bioRxivBioengineeringPreprint
A Head and Neck Cancer Patient-Specific Microphysiological System for Predicting Response to Chemoradiation
Adeel AhmediD, Nathan W. HendrikseiD, Rene Welch SchwartziD, Yuanshan Li, Marcos LaresiD, Cassidy K Felix, Adam R. BurriD, Irene M. OngiD, Paul M. HarariiD, David J. BeebeiD, Sheena C. KerriD
Abstract
Head and neck cancer (HNC) is the 6th most common malignancy worldwide. 60% of patients present with advanced disease and approximately 50% of patients recur following primary treatment. Chemoradiation remains a standard of care for most patients. However, clinicians lack functional tools to predict which patients will respond to chemoradiation prior to treatment and current models, including organoids and animal model systems, fail to capture either full complexity or patient-to-patient heterogeneity of the individual HNC tumor and microenvironment (TME). Here, we have developed, characterized, and tested a patient-specific microphysiological system (MPS) that reconstructs the HNC TME in a vascularized 3D environment. This MPS was constructed from malignant cells, fibroblasts, and immune cells from a patients surgically resected tumor, seeded within a 3D hydrogel with molded endothelial lumens. Single-cell RNA sequencing confirmed that the MPS preserved 12 transcriptionally distinct cell populations found in matched native tissue. The platform recapitulated tumor hypoxia, with a 12-fold increase in hypoxic marker expression that altered radiation response, consistent with clinical HNC biology. Compartment-resolved imaging revealed distinct treatment dynamics in tumor, stromal, and vascular regions, and individual patients exhibited divergent responses to chemoradiation in spheroid morphology, cell viability, and migration. We found the slope of spheroid area change with treatment tracked with tumor recurrence, suggesting this metric could serve as a functional predictor of therapeutic response.
- organism: human
- assay: scRNA-seq
- research focus: drug response / drug discovery
- approach: experimental assay
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A Patient-Derived Scaffold-Based 3D Culture Platform for Head and Neck Cancer: Preserving Tumor Heterogeneity for Personalized Drug Testing
Alinda Anameriç, Emilia Reszczyńska, … Matthias Nees·CellsPeer-reviewed·Oct 2, 2025
- A Bioprinted Head and Neck Cancer Organoid-Based Platform for Evaluating Multimodal Therapies
Luda Lin, Krishna K. Bommakanti, … Alice Soragni·bioRxiv·May 21, 2026
- Predicting Head and Neck Squamous Cell Carcinoma outcomes using long-term Patient-Derived Tumor Organoids
Marion Perréard, Jordane Divoux, … Louis‐Bastien Weiswald·bioRxiv·Mar 24, 2026
- Preclinical Evaluation of Chemoradiation Resistance Using 18F-FDG PET/CT in Head and Neck Squamous Cell Carcinoma
Casey Claire Heirman, Ashlyn G. Rickard, … Kyle Jon Lafata·bioRxiv·Aug 4, 2026
- MicroRNA-4776-5p acts as a radiosensitizer and predicts the prognosis of patients with head and neck cancer receiving radiotherapy
Y.-L. Lai, C.-C. Wang, … W.-C. Cheng·bioRxiv·Dec 27, 2022
- PATIENT-DERIVED ORGANOIDS CAPTURE HISTOLOGICAL, MOLECULAR AND THERAPEUTIC HETEROGENEITY IN PHARYNGEAL AND LARYNGEAL SQUAMOUS CELL CARCINOMAS
Miguel Álvarez-González, Esperanza Pozo-Agundo, … Mónica Álvarez‐Fernández·bioRxiv·Mar 26, 2026