henhaobio
Sign in

Analytical ChemistryBiophysicsPeer-reviewed journal article

Revised diffusion law permits quantitative nanoscale characterization of membrane organization

Barbora SvobodováiD, David ŠťastnýiD, Hans BlomiD, Ilya I. Mikhalyov, Natalia M. GretskayaiD, Alena BallekováiD, Erdinç SezginiD, Martin HofiD, Radek ŠachliD

PDFDOIPreprint
Citations
1
FWCI
0.30
Field percentile
46th percentile

Abstract

Formation of functional nanoscopic domains is an inherent property of plasma membranes. Stimulated emission depletion combined with fluorescence correlation spectroscopy (STED-FCS) has been used to identify such domains, however, the information obtained by STED-FCS has been limited to presence of such domains while crucial parameters have not been accessible, such as size (Rd), the fraction of occupied membrane surface (f), in-membrane lipid diffusion inside (Din) and outside (Dout) the nanodomains as well as their self-diffusion (Dd). Here, based on a revision of the diffusion law, we present an approach to retrieve these five parameters from STED-FCS data. We verify that approach on ganglioside nanodomains in giant unilamellar vesicles (GUVs), validating the Saffman-Delbruck assumption for Dd. We examined STED-FCS data in both plasma membranes of living PtK2 cells and in giant plasma membrane vesicles (GPMVs) and present a quantitative framework for molecular diffusion modes in biological membranes.

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.