Challenging a preconception: Optoacoustic spectrum differs from the absorption spectrum of proteins and dyes for molecular imaging
J. P. Fuenzalida Werner, Y. Huang, K. Mishra, A. Chmyrov, V. Ntziachristos, A. C. Stiel
Abstract
Optoacoustic (photoacoustic) imaging has seen marked technological advances in detection and data analysis, but there is less progress in understanding the photophysics of optoacoustic signal generation of commonly used contrast agents, such as dyes and chromoproteins. This gap blocks the precise development of novel agents and the accurate analysis and interpretation of Multispectral Optoacoustic Tomography (MSOT) images. To close it, we developed a multimodal laser spectrometer (MLS) to enable the simultaneous measurement of optoacoustic, absorbance, and fluorescence spectra. MLS provides reproducible, high-quality optoacoustic (non-radiative) spectra by using correction and referencing workflow. Herein, we employ MLS to analyze several common dyes (Methylene Blue, Rhodamine 800, Alexa Fluor 750, IRDye 800CW and Indocyanine green) and proteins (sfGFP, mCherry, mKate, HcRed, iRFP720 and smURFP) and shed light on their internal conversion properties. Our data shows that the optical absorption spectra do not correlate with the optoacoustic spectra for the majority of the analytes. We determine that for dyes, the transition underlying the high energy shoulder, which mostly correlates with an aggregation state of the dyes, has significantly more optoacoustic signal generation efficiency than the monomer transition. Our analyses for proteins point to a favored vibrational relaxation and optoacoustic signal generation that stems from the neutral or zwitterionic chromophores. We were able to crystalize HcRed in its optoacoustic state, confirming the change isomerization respect to its fluorescence state. Such data is highly relevant for the engineering of tailored contrast agents for optoacoustic imaging. Furthermore, discrepancies between absorption and optoacoustic spectra underline the importance of correct spectral information as a prerequisite for the spectral-unmixing schemes that are often required for in vivo imaging. Finally, optoacoustic spectra of some of the most commonly used proteins and dyes in optical imaging, recorded on our MLS, reveal previously unknown photophysical characteristics, such as unobserved photo-switching behavior.
02 /Specification & Classification
Click any tag to browse matching papers- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Multiplexed whole animal imaging with reversibly switchable optoacoustic proteins
K. Mishra, M. Stankevych, … A. C. Stiel·bioRxiv·Feb 1, 2020
- Bridging Light and Sound: a Spironaphtopyran-Rhodamine Dyad with High-Contrast Photoswitching Between Fluorescence and Photoacoustic Signal.
Nikita Kaydanov, Magdalena Olesińska, … Claire Deo·PhotoacousticsPeer-reviewed·Feb 6, 2026
- Multi-spectral optoacoustic microscopy driven by gas-filled hollow-core fiber laser pulses
Cuiling Zhang, Marcello Meneghetti, … Christos Markos·Biomedical Optics ExpressPeer-reviewed·Jul 8, 2025
- Optoacoustic flow-cytometry with light scattering referencing
M. Seeger, A. C. Stiel, V. Ntziachristos·bioRxiv·Feb 4, 2020
- Photoacoustic pigment relocalization sensor
A. Lauri, D. Soliman, … G. G. Westmeyer·bioRxiv·Oct 29, 2018
- Acoustoluminescence in Transition Metal and Rare Earth Oxides Beyond 1800 nm for In Vivo Imaging
Puxian Xiong, Sixin Xu, … Feifei Wang·bioRxiv·Dec 7, 2025