SCRATCH: A programmable, open-hardware, benchtop robot that automatically scratches cultured tissues to investigate cell migration, healing, and tissue sculpting.
Yubin LiniD, Alexander Silverman-Dultz, Madeline Bailey, Daniel J. CoheniD
Abstract
Despite the widespread popularity of the scratch assay, where a pipette is dragged through cultured tissue to create an injury gap to study cell migration and healing, the manual nature of the assay carries significant drawbacks. So much of the process depends on individual manual technique, which can complicate quantification, reduce throughput, and limit the versatility and reproducibility of the approach. Here, we present a truly open-source, low-cost, accessible, and robotic scratching platform that addresses all of the core issues. Compatible with nearly all standard cell culture dishes and usable directly in a sterile culture hood, our robot makes highly reproducible scratches in a variety of complex cultured tissues with high throughput. Moreover, we demonstrate how scratching can be programmed to precisely remove areas of tissue to sculpt arbitrary tissue and wound shapes, as well as enable truly complex co-culture experiments. This system significantly improves the usefulness of the conventional scratch assay, and opens up new possibilities in complex tissue engineering and cell biological assays for realistic wound healing and migration research.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 8
- FWCI
- 1.21
- Field percentile
- top 24%
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A Novel Cell Culture Scratch Assay Platform Generates Reproducible Gaps for Quantitative Cell Movement-Based Studies
Nicholas Wolpert, Lauren Gollahon·Advances in Bioengineering and Biomedical Science ResearchPeer-reviewed·Mar 25, 2024
- Automated In Vitro Wound Healing Assay
J. Cwycyshyn, C. Stansbury, … I. Rajapakse·bioRxiv·Dec 23, 2023
- Scratching in Style: 3D Printers as Plotters for Automated and Complex Wound Healing Assays
Hanjo Köppe, Magnus G. Richert, … Sandra Bien-Möller·iSciencePeer-reviewed·Nov 26, 2025
- In Vitro Wound Simulation: A High-Throughput Device for ScratchAssays
Jacob E. Labovitz, Patrick Kulaga, … Timothy Mark O’Shea·MethodsPeer-reviewed·Dec 19, 2025
- InVitroGap: an open-source tool for automated quantification of wound closure in the in vitro scratch assay
Rakesh K. Arya, Mohit Sindhani, … Laura Bukavina·bioRxiv·Jun 24, 2026
- Cytomove: a browser-local and reviewable workflow for scratch wound healing assay quantification
Zekeriya Düzgün·bioRxiv·Jun 10, 2026