MethodsBioengineeringPeer-reviewed journal article
In Vitro Wound Simulation: A High-Throughput Device for ScratchAssays
Jacob E. Labovitz, Patrick Kulaga, Eric M. DuBoisiD, Kunyu LiiD, Timothy Mark O’SheaiD
Abstract
Traumatic injury to the healthy central nervous system (CNS) causes mechanical tissue damage that results in localized cell death and blood-brain-barrier (BBB) disruption. CNS tissue damage stimulates a multicellular wound response to limit the extent of damage but fails to reestablish the normal function of injured tissue. There is strong interest in developing new strategies to augment regeneration after CNS injury. To enable therapy development, reliable assays to screen and identify molecular approaches to augment glial-based wound responses over fibrotic scarring are needed. Scratch assays, which involve mechanically removing cells from an in vitro culture, allow for the simulation of wounds with high throughput and tight control over applied treatments to mechanistically study cell migration and proliferation functions that are critical to effective repair. Current methods require researchers to individually scratch each well with a pipette tip, resulting in low throughput as well as inconsistent scratch widths, straightness, and efficacy within and between wells. Here, we describe the design of a quickly assembled (<30min), inexpensive (<$110) scratch assay rig that readily creates uniform scratches that are straight (average tortuosity < 1.1), have tunable widths (730-1100{micro}m), and fully remove damaged cells from the simulated wound region. Designed for a 24-well plate, the rig allows for high-throughput screening of varied experimental conditions or for testing many replicates. Application of the scratch assay device on an in vitro culture of neural progenitor cells (NPC) demonstrates the ability to detect differences in wound closure rate for three unique media conditions. These results support the implementation of this high-throughput scratch assay rig as a method to standardize and improve the efficiency of in vitro wound healing studies.
- Citations
- 2
- FWCI
- 0.69
- Field percentile
- top 26%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Automated In Vitro Wound Healing Assay
J. Cwycyshyn, C. Stansbury, … I. Rajapakse·bioRxiv·Dec 23, 2023
- SCRATCH: A programmable, open-hardware, benchtop robot that automatically scratches cultured tissues to investigate cell migration, healing, and tissue sculpting.
Yubin Lin, Alexander Silverman-Dultz, … Daniel J. Cohen·Cell Reports MethodsPeer-reviewed·Dec 1, 2024
- Scratching in Style: 3D Printers as Plotters for Automated and Complex Wound Healing Assays
Hanjo Köppe, Magnus G. Richert, … Sandra Bien-Möller·iSciencePeer-reviewed·Nov 26, 2025
- InVitroGap: an open-source tool for automated quantification of wound closure in the in vitro scratch assay
Rakesh K. Arya, Mohit Sindhani, … Laura Bukavina·bioRxiv·Jun 24, 2026
- Regenerative capacity of neural tissue scales with changes in tissue mechanics post injury
Alejandro Carnicer‐Lombarte, Damiano G. Barone, … Kristian Franze·BiomaterialsPeer-reviewed·Nov 9, 2023
- In vitro survival and neurogenic potential of central canal-derived neural stem cells depend on spinal cord injury type
Lars Erik Schiro, Ulrich Stefan Bauer, … Ioanna Sandvig·bioRxiv·Jan 27, 2024