Plant Virus Research Studies

This study identifies HCPro2 as a potyvirus-encoded scaffold protein that interacts with viral and host factors to assemble an intercellular movement complex, promoting viral infection.

This study shows that PmXPO1 is essential for the reproduction of Peregrinus maidis and supports maize mosaic virus accumulation in its insect vector.

The paper determines the complete genome of Ryegrass mottle virus using 3' RACE and 5' RACE-seq, identifies missing UTR sequences, and develops an infectious cDNA construct that successfully infects oat plants.

The paper identifies genetic diversity and recombination in Horsegram yellow mosaic virus isolates from pole bean in South India using full genome sequencing and phylogenetic analysis.

Virotest is a bioinformatics pipeline for identifying viruses in plants using small RNA data, prioritizing read mapping over assembly to improve sensitivity and reduce sequencing depth requirements.

The paper uses NGS to analyze the virome of symptomatic chilli plants, identifying seven viruses including two new reports from India.

The paper identifies new alleles in eIF4E and eIFiso4E genes from Prunus species that are linked to resistance against Plum Pox Virus (PPV).

The paper identifies mixed infections of Chilli Leaf Curl Virus and Candidatus Phytoplasma trifolii in Capsicum annuum samples from India using molecular computing and phylogenetic analysis.

This study shows that loss of H3.1K27me1 in Arabidopsis leads to resistance against Geminivirus by sequestering DNA repair proteins to defense genes and rDNA, reducing viral replication.

The paper identifies master transcription regulators and their targets in tomato infected with PSTVd variants, revealing key transcription factors involved in defense and signaling pathways.

The paper identifies Rsc3K as a resistance gene in soybean that interacts with the viral protein P3 to confer resistance to SMV-SC3.

This study analyzes the genetic structure and diversity of BBTV isolates in the Philippines, identifying three haplotype groups and suggesting recent population expansion.

The paper diagnoses a new TYLCV isolate in Iraq using NGS and bioinformatics, revealing a complete viral sequence and phylogenetic relationship to an Iranian isolate.

The paper develops PCR primers for detecting tomato spotted wilt virus and compares diagnostic test systems to identify effective methods for laboratory diagnosis.

The paper predicts sugarcane miRNAs that can silence SCBV genes through in-silico algorithms and evaluates their efficacy in vitro.

The paper identifies and characterizes a novel Emaravirus, MaMaV, from symptomatic maple trees using RNA-Seq and RT-PCR, showing its association with leaf mottle symptoms.

The paper investigates the structural properties of the coat protein of Banana Bunchy Top Virus through computational and experimental methods, revealing insights into its fold and potential role in vector transmission.

This paper describes a case study where pseudorecombinants of begomoviruses were discovered through accidental transmission to Malva parviflora plants, revealing insights into virus-vector interactions in complex infections.

The paper assembles and characterizes the transcriptome of Vigna mungo to explore molecular mechanisms of MYMIV resistance, identifying key pathways and transcriptomic changes.

This study identifies two amino acid mutations in p28 that separate its replication function from its role in eliciting superinfection exclusion in turnip crinkle virus.

This paper uses bioinformatics methods to analyze CBSV genetic diversity, identifying three clades and key genomic regions influencing divergence, to inform disease management strategies.

The paper develops an HTAS approach to assess genetic diversity of plant viruses within and between hosts, demonstrating methods to estimate bias and implement automated variant calling.