Author

A. K. Bentzen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 3

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Research Focus:differential expression· 2 Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Assay:proteomics· 1

Frequent Co-Authors

S. R. Hadrup· 3 shared M. Kadivar· 2 shared U. K. Hansen· 2 shared A. Borch· 1 shared A. M. Marquard· 1 shared A.-m. Bjerregaard· 1 shared E. Dionisio· 1 shared E. S. Marquez· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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3 shared papersImmunology

S. R. Hadrup

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Author profile →

3 papers

Recent·Most cited

Identification and characterization of neoantigen-reactive CD8+ T cells following checkpoint blockade therapy in a pan-cancer setting

K. H. Moss, U. K. Hansen, V. A. B. De Lima, A. Borch, E. S. Marquez, A.-m. Bjerregaard, O. Oestrup, A. K. Bentzen, A. M. Marquard, M. Kadivar, I. M. Svane, U. Lassen, S. R. Hadrup

The paper detects neoantigen-reactive CD8+ T cells in tumor biopsies and peripheral blood post-checkpoint blockade therapy and identifies peptide hydrophobicity and treatment-induced phenotypes as factors influencing their response.

bioRxiv · Mar 17, 2024 · PreprintImmunology

Simultaneous analysis of pMHC binding and reactivity unveils virus-specific CD8 T cell immunity to a concise epitope set

N. P. Kristensen, E. Dionisio, A. K. Bentzen, T. Tamhane, J. S. Kemming, G. Nos, L. F. Voss, U. K. Hansen, G. M. Lauer, S. R. Hadrup

The paper identifies a concise set of 137 virus-specific CD8 T cell epitopes recognized by human T cells, with 84% showing prevalent reactivity and associations with effector and memory phenotypes.

bioRxiv · Nov 6, 2023Immunology

ATRAP - Accurate T cell Receptor Antigen Pairing through data-driven filtering of sequencing information from single-cells

H. R. Povlsen, A. K. Bentzen, M. Kadivar, L. E. Jessen, S. R. Hadrup, M. Nielsen

ATRAP filters sequencing artifacts to accurately pair T cell receptors with their cognate peptide-MHC ligands from single-cell data, identifying 1494 high-confidence pairs across 16 donors.

bioRxiv · Aug 31, 2022 · PreprintImmunology