Author

A. Salamov

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 3 Microbiology· 3 Ecology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 4 Research Focus:chromatin & epigenetic regulation· 3 Approach:experimental assay· 3 Assay:metagenomics· 3 Approach:statistical model· 3 Approach:comparative / phylogenetic analysis· 2 Research Focus:host-pathogen & immune response· 2 Research Focus:cell type annotation· 1

Frequent Co-Authors

I. V. Grigoriev· 6 shared A. Lipzen· 2 shared B. Henrissat· 2 shared J. E. Stajich· 2 shared J. W. Spatafora· 2 shared K. Barry· 2 shared K. W. Barry· 2 shared M. Yan· 2 shared

Activity by Year

2020-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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6 shared papersEvolutionary Biology

I. V. Grigoriev

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Phylogeny, morphology, virulence, ecology, and host range of Ordospora pajunii (Ordosporidae), a microsporidian symbiont of Daphnia spp.

M. K. Dziuba, K. M. McIntire, K. Seto, E. S. Davenport, M. A. Rogalski, C. D. Gowler, E. Baird, M. Vaandrager, C. Huerta, R. Jaye, F. E. Corcoran, A. Withrow, S. Ahrendt, A. Salamov, M. Nolan, , M. A. Duffy

This paper investigates the impact of Ordospora pajunii on Daphnia hosts, finding low virulence and context-dependent effects, and identifies it as a valuable model for studying mutualism-parasitism shifts.

bioRxiv · Apr 21, 2023 · PreprintEcology

Divergent evolution of early terrestrial fungi reveals the evolution of Mucormycosis pathogenicity factors

Y. Wang, Y. Chang, J. Ortanez, J. F. Pena, D. Carter-House, N. K. Reynolds, M. E. Smith, G. Benny, S. J. Mondo, A. Salamov, A. Lipzen, J. Pangilinan, J. Guo, K. LaButti, W. Andreopolous, , J. E. Stajich

This study investigates the divergent evolution of zygomycete fungi, identifying lineage-specific genomic elements and evolutionary relationships that contribute to Mucormycosis pathogenicity.

bioRxiv · Jun 24, 2022Evolutionary Biology

A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrients acquisition for obligate biotrophy

P. Guerillot, A. Salamov, C. Louet, E. Morin, P. Frey, I. V. Grigoriev, S. Duplessis

This study identifies an expansion of oligopeptide transporter genes in rust fungi, suggesting a specialized role in nutrient acquisition during biotrophic growth.

bioRxiv · Apr 20, 2022Microbiology

Playing with FiRE: A genome resolved view of the soil microbiome responses to high severity forest wildfire

A. R. Nelson, A. B. Narrowe, C. C. Rhoades, T. S. Fegel, R. A. Daly, H. K. Roth, R. K. Chu, K. K. Amundson, S. E. Geonczy, J. B. Emerson, R. B. Young, A. S. Steindorff, S. J. Mondo, I. V. Grigoriev, A. Salamov, , M. J. Wilkins

The paper analyzes soil microbiome responses to high severity wildfires using genome-resolved data, finding Actinobacteria dominance and microbial traits enhancing post-fire survival.

bioRxiv · Aug 17, 2021 · PreprintMicrobiology

Within-Arctic horizontal gene transfer as a driver of convergent evolution in distantly related microalgae

R. G. Dorrell, A. Kuo, Z. Fussy, E. H. Richardson, A. Salamov, N. Zarevski, N. J. Freyria, F. M. Ibarbalz, J. Jenkins, J. J. Pierella Karlusich, A. Stecca Steindorff, R. E. Edgar, L. Handley, K. Lail, A. Lipzen, , C. Lovejoy

The paper identifies horizontal gene transfer as a driver of convergent evolution in Arctic microalgae, highlighting ice-binding domain gene transfers between distantly related species.

bioRxiv · Jul 31, 2021Evolutionary Biology

Co-cultivation of the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii enhances transcription of carbohydrate binding modules

J. L. Brown, C. L. Swift, S. Mondo, S. Seppala, A. Salamov, V. Singan, B. Henrissat, J. K. Henske, S. Lee, G. He, M. Yan, K. Barry, I. V. Grigoriev, M. A. O'Malley

This study shows that co-culturing the anaerobic fungus Caecomyces churrovis with Methanobacterium bryantii increases transcription of carbohydrate binding modules and related enzymes, enhancing biomass breakdown and sugar uptake.

bioRxiv · Jul 9, 2021Microbiology

Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi

Y. Chang, D. Rochon, S. Sekimoto, Y. Wang, M. Chovatia, L. Sandor, A. Salamov, I. V. Grigoriev, J. E. Stajich, J. W. Spatafora

The paper uses genome and transcriptome data from Olpidium to analyze its phylogenetic position relative to non-flagellated terrestrial fungi, finding it as the closest zoosporic relative.

bioRxiv · Sep 16, 2020Evolutionary Biology