Author
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
9 papers
Recent·Most cited
L. A. Hug, R. Hatzenpichler, C. Moraru, A. Soares, F. Meyer, A. Heyder, A. J. Probst
The paper proposes a roadmap for fair reuse of public microbiome data by introducing a Data Reuse Information tag (DRI) to facilitate communication between data creators and consumers.
bioRxiv · Jun 21, 2024 · PreprintMicrobiology
T. L. Stach, A. Deep, I. Madge Pimentel, D. Buchner, M. A. Borton, A. Soares, J. Starke, T. L. V. Bornemann, P. M. Rehsen, J. Boenigk, M. Vos, F. Leese, D. Beisser, A. J. Probst
This study shows river sediment microbiomes are highly sensitive to reduced flow velocity, leading to altered community compositions and stress responses that recover after two weeks.
bioRxiv · Jun 7, 2024 · PreprintEcology
S. P. Esser, V. Turzynski, J. Plewka, C. J. Moore, I. Banas, A. Soares, J. Lee, T. Woyke, A. J. Probst
This study compares the metatranscriptomes of two Candidatus Altiarchaeum populations in different subsurface ecosystems, identifying gene expression differences related to metabolism and defense mechanisms.
bioRxiv · Nov 20, 2023 · PreprintMicrobiology
E. Klontz, J. O. Obi, Y. Wang, G. Glendening, J. Carr, C. Tsibouris, S. Buddula, S. Nallar, A. Soares, D. Beckett, J. S. Redzic, E. Eisenmesser, C. Palm, K. Schmidt, A. Scudder, , G. A. Snyder
The paper reports the crystal structure of Acinetobacter baumannii TIR domain and its NAD+ hydrolase activity, showing conformational changes and kinetic effects upon substrate binding.
bioRxiv · May 19, 2023 · PreprintBiochemistry
V. Turzynski, L. Griesdorn, C. Moraru, A. Soares, S. A. Simon, T. L. Stach, J. Rahlff, S. P. Esser, A. J. Probst
The paper studies virus-host dynamics in archaeal groundwater biofilms over three years, finding a steady increase in viral infections and a stable bacterial community dominated by Desulfobacterota.
bioRxiv · Feb 3, 2023 · PreprintMicrobiology
J. Rahlff, S. P. Esser, J. Plewka, M. E. Heinrichs, A. Soares, C. Scarchilli, P. Grigioni, H. Wex, H.-A. Giebel, A. J. Probst
The paper shows marine viruses disperse bidirectionally between air-sea interface ecosystems and rainwater, with genetic evidence of virus-host interactions and implications for atmospheric processes.
bioRxiv · Jun 21, 2022Microbiology
I. Monsees, V. Turzynski, S. P. Esser, A. Soares, L. I. Timmermann, K. Weidenbach, J. Banas, M. Kloster, B. Beszteri, R. A. Schmitz, A. J. Probst
This paper uses Raman microspectroscopy to identify virocells by analyzing biochemical changes in bacterial and archaeal cells during viral infection.
bioRxiv · Sep 22, 2021 · PreprintMicrobiology
H. Farooq, J. Anderson, F. Belluardo, C. Nanvonamuquitxo, D. Bennett, J. Moat, A. Soares, S. Faurby, A. Antonelli
The paper develops and validates the WEGE index to rank biodiversity importance of sites based on species endemism and threat status, outperforming existing metrics for conservation prioritization.
bioRxiv · Jan 17, 2020Ecology
A. Soares, A. Edwards, D. An, A. Bagnoud, M. Bomberg, K. Budwill, S. Caffrey, M. Fields, B. Toner, J. Gralnick, V. Kadnikov, L. Momper, M. Osburn, A. Mu, J. Moreau, , A. Mitchell
This study analyzes microbial diversity in the terrestrial deep subsurface using 16S rRNA gene data, finding that aquifer lithology controls bacterial community diversity and identifying a core microbial consortium across different rock types.
bioRxiv · Apr 9, 2019 · PreprintMicrobiology