Author

Abdullah Naqvi

Columbia University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Organism:human· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Anna Schoonen· 1 shared Elham AziziiD· 1 shared Hannah Khanshali· 1 shared Jonathan GuoiD· 1 shared José L. McFaline‐FigueroaiD· 1 shared Justin HongiD· 1 shared Keith Lloyd LigoniD· 1 shared Lingting ShiiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Anna Schoonen

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1 paper

Recent·Most cited

Mapping kinase-dependent tumor immune adaptation with multiplexed single-cell CRISPR screens

Lingting Shi, Ross M. Giglio, Qingyuan Cai, Mathini Vaikunthan, Justin Hong, Abdullah Naqvi, Marina Milea, Hannah Khanshali, Anna Schoonen, Nicholas Y. Hou, Jonathan Guo, Melanie Fraidenburg, Xumin Shen, Seth W. Malinowski, Keith Lloyd Ligon, , José L. McFaline‐Figueroa

The paper develops a CRISPR screening framework to map kinase-dependent immune evasion mechanisms in glioblastoma by integrating single-cell transcriptomics and deep generative models.

bioRxiv · Feb 28, 2026 · PreprintGenomics