Author

Ahmed Naguib

BioNano Genomics (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:genome assembly· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1 Research Focus:variant calling· 1

Frequent Co-Authors

AF Scott· 1 shared Alan F. ScottiD· 1 shared Andy Wing Chun PangiD· 1 shared David B. JaffeiD· 1 shared David W. MohriD· 1 shared Deanna M. ChurchiD· 1 shared DM Church· 1 shared DW Mohr· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

AF Scott

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2 papers

Recent·Most cited

A chromosome-length assembly of the Hawaiian Monk seal (Neomonarchus schauinslandi) confirms genomic stability in the Pinnipeds and a prolonged history of "genetic purging"

David W. Mohr, Stephen J. Gaughran, Justin E. Paschall, Ahmed Naguib, Andy Wing Chun Pang, Olga Dudchenko, Erez Lieberman Aiden, Deanna M. Church, Alan F. Scott

The paper presents a chromosome-length assembly of the Hawaiian monk seal, revealing genomic stability and low variation, with implications for conservation and evolutionary studies.

bioRxiv · Mar 31, 2022 · PreprintGenomics

Improved de novo Genome Assembly: Linked-Read Sequencing Combined with Optical Mapping Produce a High Quality Mammalian Genome at Relatively Low Cost

DW Mohr, Ahmed Naguib, NI Weisenfeld, V Kumar, Preyas Shah, DM Church, David B. Jaffe, AF Scott

This paper combines linked-read sequencing and optical mapping to improve de novo genome assembly for the Hawaiian Monk seal, achieving higher scaffold quality and length than existing methods.

bioRxiv · Apr 19, 2017 · PreprintGenomics