Author

Akemi Yoshida

University of Miyazaki

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3 Evolutionary Biology· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:C. elegans· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:chromatin & epigenetic regulation· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Taisei KikuchiiD· 5 shared Simo SuniD· 4 shared Kazuki SatoiD· 3 shared Asako SugimotoiD· 2 shared Nami HarutaiD· 2 shared Yasunobu Maeda· 2 shared Asuka Kounosu· 1 shared Atsushi Hikima· 1 shared

Activity by Year

2022-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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5 shared papersGenomics

Taisei KikuchiORCID

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5 papers

Recent·Most cited

A chromosome-level genome assembly of the classical model nematode Panagrellus redivivus for comparative studies of parasitism evolution

Kazuki Sato, Simo Sun, Tatsuya Yamashita, Akemi Yoshida, Ryoji Shinya, Paul W. Sternberg, Taisei Kikuchi

The paper presents a chromosome-level genome assembly of Panagrellus redivivus, enabling comparative studies of parasitism evolution by providing a non-parasitic reference genome.

Gigabyte · Oct 30, 2026Peer-reviewedGenomics

Active and unusually expanded PIF/Harbinger transposable elements in the Caenorhabditis inopinata genome

Kazuki Sato, Xiaodan Jin, Shun Oomura, Kazuma Kawahara, Simo Sun, Akemi Yoshida, Nami Haruta, Asako Sugimoto, Taisei Kikuchi

The paper identifies two PIF/Harbinger transposable element families in C. inopinata, showing differences in amplification timing and mobilisation competence.

Genome Biology and Evolution · Sep 28, 2026Peer-reviewedGenetics

A chromosome-level genome resource for the lethal tapeworm Sparganum proliferum, with candidate genomic safe harbours for functional genetics

Atsushi Hikima, Simo Sun, Tetsuya Okino, Kensei Kinoshita, Akemi Yoshida, Yasunobu Maeda, Kenji Ishiwata, Hirotaka Kanuka, Taisei Kikuchi

Journal of Heredity · Jan 4, 2026Peer-reviewedGenomics

Programmed DNA elimination was present in the last common ancestor of Caenorhabditis nematodes

Lewis Stevens, Simo Sun, Nami Haruta, Yasunobu Maeda, Leyun Xiao, Naoki Uwatoko, Manuela R. Kieninger, Kazuki Sato, Akemi Yoshida, Dominic E. Absolon, Joanna Collins, Asako Sugimoto, Taisei Kikuchi, Mark Blaxter

The paper identifies programmed DNA elimination in three Caenorhabditis species, showing it was present in their last common ancestor and later lost in some lineages.

bioRxiv · Oct 23, 2025 · PreprintEvolutionary Biology

piRNA-like small RNAs target transposable elements in a Clade IV parasitic nematode

Mona Suleiman, Asuka Kounosu, Ben Murcott, Mehmet Dayı, Rebecca Pawluk, Akemi Yoshida, Mark Viney, Taisei Kikuchi, Vicky L. Hunt

The paper identifies sRNA pathways in a Clade IV nematode that regulate transposable elements, resembling PIWI pathway mechanisms in C. elegans.

Scientific Reports · Jun 16, 2022Peer-reviewedGenomics