Author

Alain Pélisson

Centre National de la Recherche Scientifique

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:Drosophila· 1 Approach:experimental assay· 1

Frequent Co-Authors

Bruno MugatiD· 2 shared Marion Varoqui· 2 shared Mourdas MohamediD· 2 shared Séverine ChambeyroniD· 2 shared Anna-Sophie Fiston-LavieriD· 1 shared Charlotte GrimaudiD· 1 shared Daniel GourioniD· 1 shared François SabotiD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersGenomics

Bruno MugatORCID

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2 papers

Recent·Most cited

Temporal and spatial niche partitioning in a retrotransposon community of the Drosophila genome

Marion Varoqui, Mourdas Mohamed, Bruno Mugat, Daniel Gourion, Maëlys Lemoine, Alain Pélisson, Charlotte Grimaud, Séverine Chambeyron

The paper shows that four Drosophila LTR-RTEs integrate into distinct chromatin domains and exhibit differential expression in specific tissues, leading to temporal and spatial niche partitioning.

bioRxiv · Aug 14, 2024 · PreprintGenomics

TrEMOLO: Accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches

Mourdas Mohamed, François Sabot, Marion Varoqui, Bruno Mugat, Katell Audouin, Alain Pélisson, Anna-Sophie Fiston-Lavier, Séverine Chambeyron

TrEMOLO estimates transposable element allele frequencies using long-read sequencing data by combining assembly and mapping approaches, outperforming existing tools in benchmark tests.

bioRxiv · Jul 21, 2022 · PreprintBioinformatics