Author

Alex Kalinka

Cancer Research Horizons

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Andy SayeriD· 1 shared Ashutosh TrehaniD· 1 shared Chara Mastrokalou· 1 shared Curtis HartiD· 1 shared David WalteriD· 1 shared Douglas Ross‐ThrieplandiD· 1 shared Khalid SaeediD· 1 shared Magdalena E StraußiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Andy SayerORCID

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1 paper

Recent·Most cited

Comparative Single-Cell Profiling of CRISPR Knockout and Interference Defines Modality-Specific Strengths in Functional Genomics

Nikhil Gupta, Andy Sayer, Malwina Prater, Chara Mastrokalou, Khalid Saeed, Curtis Hart, Ricardo J. Miragaia, Ashutosh Trehan, Ultan McDermott, Magdalena E Strauß, Douglas Ross‐Thriepland, David Walter, Alex Kalinka

This study compares CRISPR knockout and interference methods using single-cell RNA sequencing to evaluate their strengths in functional genomics.

bioRxiv · Aug 27, 2026 · PreprintGenomics