Author

Anna Chen

University of California, San Francisco

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Molecular Biology· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 3 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Bryan GreenhouseiD· 3 shared Sofonias Kifle TessemaiD· 3 shared Elias Michael DuarteiD· 2 shared Maxwell MurphyiD· 2 shared Noam TeyssieriD· 2 shared Emily D. CrawfordiD· 1 shared Francisco SaúteiD· 1 shared Gugu P. MaphalalaiD· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersMolecular Biology

Bryan GreenhouseORCID

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Author profile →

3 papers

Recent·Most cited

Optimization of whole-genome sequencing of Plasmodium falciparum from low-density dried blood spot samples

Noam Teyssier, Anna Chen, Elias Michael Duarte, Rene V. Sit, Bryan Greenhouse, Sofonias Kifle Tessema

This study optimizes whole-genome sequencing of Plasmodium falciparum from low-density dried blood spots by evaluating DNA extraction, digestion, and amplification methods.

Malaria Journal · Feb 26, 2021Peer-reviewedMolecular Biology

Sensitive, highly multiplexed sequencing of microhaplotypes from the Plasmodium falciparum heterozygome

Sofonias Kifle Tessema, Nicholas J. Hathaway, Noam Teyssier, Maxwell Murphy, Anna Chen, Özkan Aydemir, Elias Michael Duarte, Wilson Simone, James M. Colborn, Francisco Saúte, Emily D. Crawford, Pedro Aíde, Jeffrey A. Bailey, Bryan Greenhouse

The paper develops a method to sequence microhaplotypes from Plasmodium falciparum heterozygomes, achieving high coverage, specificity, and sensitivity for detecting polyclonal infections.

The Journal of Infectious Diseases · Aug 24, 2020Peer-reviewedMolecular Biology

High genetic diversity of Plasmodium falciparum in the low transmission setting of the Kingdom of Eswatini

Michelle E. Roh, Sofonias Kifle Tessema, Maxwell Murphy, Nomcebo Nhlabathi, Nomcebo Mkhonta, Sibonakaliso Vilakati, Nyasatu Ntshalintshali, Manik Saini, Gugu P. Maphalala, Anna Chen, Jordan Wilheim, Lisa M. Prach, Roly Daniel Gosling, Simon Kunene, Michelle S. Hsiang, Bryan Greenhouse

The paper characterizes Plasmodium falciparum genetic diversity in Eswatini, finding high diversity despite low transmission, with no added value of diversity metrics in classifying imported vs. local infections.

The Journal of Infectious Diseases · Jun 12, 2019Peer-reviewedGenetics