Author

Avantika Dhabaria

Every paper listing this name carries an ORCID.

Identified by ORCID

Avantika DhabariaiD2 papers · Memorial Sloan Kettering Cancer Center

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:proteomics· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Organism:human· 1 Organism:mouse· 1 Research Focus:protein folding & dynamics· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Akihide YoshimiiD· 1 shared Alex KentsisiD· 1 shared Anish GuduriD· 1 shared Beatrix M. UeberheideiD· 1 shared Emily A. KawaleriD· 1 shared Hagar IsmailiD· 1 shared John Thomas PoirieriD· 1 shared Liping JiangiD· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Akihide YoshimiORCID

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2 papers

Recent·Most cited

Geranylgeranylated-SCFFBXO10 Regulates Selective Outer Mitochondrial Membrane Proteostasis and Function

Sameer Ahmed Bhat, Zahra Vasi, Liping Jiang, Shruthi Selvaraj, Rachel Ferguson, Sanaz Salarvand, Anish Gudur, Ritika Adhikari, Veronica Castillo, Hagar Ismail, Avantika Dhabaria, Beatrix M. Ueberheide, Shafi Kuchay

This study identifies how geranylgeranylation of FBXO10 enables its targeting to the outer mitochondrial membrane, where it regulates PGAM5 ubiquitination and mitochondrial function.

Cell Reports · Sep 21, 2024Peer-reviewedCell Biology

ProteomeGenerator: A framework for comprehensive proteomics based on de novo transcriptome assembly and high-accuracy peptide mass spectral matching

Paolo Cifani, Avantika Dhabaria, Zining Chen, Akihide Yoshimi, Emily A. Kawaler, Omar Ibrahim Abdel-Wahab, John Thomas Poirier, Alex Kentsis

ProteomeGenerator enables sample-specific proteome discovery by integrating transcriptome sequencing and high-accuracy mass spectrometry, identifying non-canonical protein isoforms and improving proteogenomic analysis.

Journal of Proteome Research · Oct 8, 2018Peer-reviewedBioinformatics