Author

Ayshan Aliyeva

European Molecular Biology Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Aaron Gut· 1 shared Auguste Uzuotaite· 1 shared Ayellet V. SegrèiD· 1 shared Ben AsaniiD· 1 shared Bjoern M. EskofieriD· 1 shared Christian ArnoldiD· 1 shared Christophe LancriniD· 1 shared Chrysi KapsaliiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperDevelopmental Biology

Aaron Gut

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2 papers

Recent·Most cited

REECAP: Contrastive learning of retinal aging reveals genetic loci linking morphology to eye disease

Liubov Shilova, Daniel Sens, Ayshan Aliyeva, Shubham Chaudhary, Qiaohan Xu, Emmanuelle Salin, Johannes Benedikt Schiefelbein, Ben Asani, Oana Veronica Amarie, Elida Schneltzer, Ayellet V. Segrè, Julia A. Schnabel, Na Cai, Bjoern M. Eskofier, Francesco Paolo Casale

REECAP uses contrastive learning to link retinal aging patterns with genetic loci associated with eye diseases, identifying 178 loci including 27 linked to age-related eye diseases.

medRxiv · Nov 19, 2025 · PreprintGenetic & Genomic Medicine

Identifying a novel role for the master regulator Tal1 in the Endothelial to Hematopoietic Transition

Yasmin Natalia Serina Secanechia, Isabelle Bergiers, Zbigniew Rogon, Christian Arnold, Nicolas Descostes, Stephanie Le, Natalia López-Anguita, Kerstin Ganter, Chrysi Kapsali, Lea Bouilleau, Aaron Gut, Auguste Uzuotaite, Ayshan Aliyeva, Judith B. Zaugg, Christophe Lancrin

The paper investigates the role of Tal1, Lmo2, and Lyl1 in the Endothelial to Hematopoietic Transition using a mouse embryonic-stem cell model and multi-omics approaches, finding that Tal1 expression in endothelial cells is crucial for the transition.

bioRxiv · Oct 3, 2021 · PreprintDevelopmental Biology