Author

B. Coburn

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:metagenomics· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:GWAS / association mapping· 1

Frequent Co-Authors

A. M. Rooney· 1 shared A. Spreafico· 1 shared B. Chen· 1 shared D. E. Tullis· 1 shared D. Guttman· 1 shared D. M. Hwang· 1 shared E. Allen-Vercoe· 1 shared J. Diaz Caballero· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperMicrobiology

A. M. Rooney

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Alterations in intestinal Proteobacteria and antimicrobial resistance gene burden in individuals administered microbial ecosystem therapeutic (MET-2) for recurrent Clostridioides difficile infection

A. M. Rooney, K. Cochrane, S. Fedsin, S. Yao, S. Anwer, S. Dehmiwal, S. Hota, S. Poutanen, E. Allen-Vercoe, B. Coburn

This study compares the effects of MET-2 and FMT on reducing Proteobacteria and antimicrobial resistance genes in patients with recurrent C. difficile infection.

bioRxiv · Nov 4, 2022 · PreprintMicrobiology

Two-target quantitative PCR to predict library composition for shallow shotgun sequencing

M. Y. Cho, M. Oliva, A. Spreafico, B. Chen, X. Wei, Y. Choi, R. Kaul, L. L. Siu, B. Coburn, P. H. H. Schneeberger

The paper develops a two-target qPCR assay to predict human-to-microbe ratios in samples, enabling better planning of shotgun sequencing experiments.

bioRxiv · Sep 21, 2020Microbiology

A Genome-Wide Association Analysis Reveals a Role for Recombination in the Evolution of Antimicrobial Resistance in Burkholderia multivorans

J. Diaz Caballero, S. T. Clark, P. W. Wang, S. L. Donaldson, B. Coburn, D. E. Tullis, Y. C. Yau, V. J. Waters, D. M. Hwang, D. Guttman

This study uses longitudinal genomic data from Burkholderia multivorans infections to identify genetic variants associated with antimicrobial resistance and shows recombination plays a role in adaptation.

bioRxiv · May 18, 2018Evolutionary Biology