Author

Bing Liu

First Affiliated Hospital of Xi'an Jiaotong University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:large language model· 1

Frequent Co-Authors

Alexandre Antonelli· 1 shared Chenxi YuiD· 1 shared Chunhong Zheng· 1 shared Han KuiiD· 1 shared Honghao Ma· 1 shared Huan CheniD· 1 shared Jiacheng XiongiD· 1 shared Jingxi Gao· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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1 shared paperEvolutionary Biology

Alexandre Antonelli

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Author profile →

3 papers

Recent·Most cited

DEPICT enables sample-centric therapeutic prioritization across evolving and spatially heterogeneous tumor states

Shiwen Ma, Shi Yan, Xiaohu Wen, Chenxi Yu, Honghao Ma, Wenzhong Teng, Xuantong Zhou, Jingxi Gao, Siyun Wang, Mingxuan Li, Yanyi Huang, Han Kui, Nan Wu, Bing Liu, Chunhong Zheng

DEPICT prioritizes therapies within tumor contexts using deep learning, showing effectiveness across different tumor states and spatial heterogeneity.

bioRxiv · Oct 9, 2026 · PreprintBioinformatics

The diversity, evolution, and conservation of African plants

Wyckliffe Omondi Omollo, Xueqin Wang, Liguo Zhang, Xinru Zhang, Yuxuan Liu, Tao Xiong, Bing Liu, Bing Liu, Shengwei Wang, Moses Kirega Gichua, Robert Wahiti Gituru, Alexandre Antonelli, Qing-Feng Wang, ZhiDuan Chen, Miao Sun

The paper evaluates diversification rates and phylogenetic diversity across African plant genera, revealing mismatches between diversification hotspots and conservation priorities.

bioRxiv · Sep 24, 2026 · PreprintEvolutionary Biology

FAPM: Functional Annotation of Proteins using Multi-Modal Models Beyond Structural Modeling

Wenkai Xiang, Zhaoping Xiong, Huan Chen, Jiacheng Xiong, Wei Zhang, Zunyun Fu, Mingyue Zheng, Bing Liu, Qian Shi

FAPM improves protein functional annotation by combining protein sequence and language models, outperforming sequence-only methods on benchmarks and phage proteins with few homologs.

Bioinformatics · Nov 12, 2024Peer-reviewedBioinformatics