Author

C. H. Remien

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Ecology· 2 Evolutionary Biology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 7 Research Focus:host-pathogen & immune response· 3 Assay:metagenomics· 3 Organism:bacteria (other)· 2 Research Focus:benchmarking· 2 Research Focus:cell type annotation· 2 Approach:Bayesian inference· 1 Research Focus:differential expression· 1

Frequent Co-Authors

B. J. Ridenhour· 3 shared J. J. Bull· 3 shared S. M. Krone· 3 shared A. Basinski· 1 shared A. E. Vasdekis· 1 shared A. Omsland· 1 shared B. Bird· 1 shared B. Karki· 1 shared

Activity by Year

2018-2020 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 9 mutual co-author links

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3 shared papersMicrobiology

B. J. Ridenhour

Mutual co-authors in cluster

Author profile →

8 papers

Recent·Most cited

Trait Evolution in Microbial Communities

L. Zhao, B. J. Ridenhour, C. H. Remien

The paper models how traits in microbial communities evolve under eco-evolutionary dynamics by integrating population genetics with resource-mediated dynamics.

bioRxiv · Dec 15, 2020 · PreprintMicrobiology

Vector dynamics influence spatially imperfect genetic interventions against disease

M. K. Yuksel, C. H. Remien, B. Karki, J. J. Bull, S. M. Krone

The paper models how human travel affects the persistence of vector-borne diseases in spatially structured populations with imperfect genetic interventions.

bioRxiv · Jul 16, 2020Ecology

Cell Type Development in Chlamydia trachomatis Follows a Program Intrinsic to the Reticulate Body.

T. J. Chiarelli, N. Grieshaber, A. Omsland, C. H. Remien, S. S. Grieshaber

This study develops mathematical models to determine if Chlamydia trachomatis RB to EB development is intrinsic or extrinsic, finding it follows an intrinsic program linked to growth and division.

bioRxiv · Mar 13, 2020 · PreprintMicrobiology

Bayesian estimation of Lassa virus epidemiological parameters: implications for spillover prevention using wildlife vaccination

S. L. Nuismer, C. H. Remien, A. Basinski, T. Varrelman, N. Layman, K. Rosenke, B. Bird, M. Jarvis, P. Barry, E. Fichet-Calvet

This paper develops a Bayesian method to estimate Lassa virus epidemiological parameters and evaluates rodent vaccination efficacy using simulated and real data from Guinea.

bioRxiv · Nov 13, 2019Ecology

Microbial phenotypic heterogeneity in response to a metabolic toxin: continuous, dynamically shifting distribution of formaldehyde tolerance in Methylobacterium extorquens populations

J. A. Lee, S. Riazi, S. Nemati, J. V. Bazurto, A. E. Vasdekis, B. J. Ridenhour, C. H. Remien, C. J. Marx

The paper shows that Methylobacterium extorquens populations exhibit continuous, dynamic formaldehyde tolerance heterogeneity without genetic mutations.

bioRxiv · Sep 19, 2019Microbiology

Spatial structure undermines parasite suppression by gene drive cargo

J. J. Bull, C. H. Remien, R. Gomuliiewicz, S. M. Krone

The paper shows spatial structure in vector populations can hinder disease eradication by gene drive cargo by facilitating disease agent resistance evolution.

bioRxiv · Sep 11, 2019Evolutionary Biology

Gene-drive-mediated extinction is thwarted by evolution of sib mating

J. J. Bull, C. H. Remien, S. M. Krone

The paper shows that sib mating can evolve to counteract gene drives, maintaining mean fitness above zero and potentially preventing extinction.

bioRxiv · Feb 22, 2019Evolutionary Biology

Parameter Identifiability of the Generalized Lotka-Volterra Model for Microbiome Studies

C. H. Remien, M. J. Eckwright, B. J. Ridenhour

This study investigates whether relative abundance data can parameterize the generalized Lotka-Volterra model for microbiome dynamics, finding that relative data alone can estimate relative interaction strengths and dynamics.

bioRxiv · Nov 6, 2018 · PreprintMicrobiology