Author

C. Henkel

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Physiology· 2 Biophysics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Assay:scRNA-seq· 2 Organism:zebrafish· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Approach:experimental assay· 1

Frequent Co-Authors

E. Ager-Wick· 2 shared F.-A. Weltzien· 2 shared K. Siddique· 2 shared R. Fontaine· 2 shared A. Bakulin· 1 shared A. Zinkevich· 1 shared C. Choe· 1 shared D. B. T. Cox· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersPhysiology

E. Ager-Wick

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Ribonanza: deep learning of RNA structure through dual crowdsourcing

S. He, R. Huang, J. Townley, R. C. Kretsch, T. G. Karagianes, D. B. T. Cox, H. Blair, D. Penzar, V. Vyaltsev, E. Aristova, A. Zinkevich, A. Bakulin, H. Sohn, D. Krstevski, T. Fukui, , R. Das

The paper introduces RibonanzaNet, a deep learning model trained on crowdsourced RNA chemical mapping data to predict RNA structure and related properties.

bioRxiv · Feb 24, 2024 · PreprintBiophysics

Integrative transcriptomics reveals ectopic lipid homeostasis mechanisms in non-endocrine cells of the teleost pituitary

E. Ager-Wick, G. Maugars, K. von Krogh, R. Nourizadeh-Lillabadi, K. Siddique, R. Fontaine, F.-A. Weltzien, C. Henkel

The paper uses RNA-seq in medaka to show non-endocrine pituitary cells regulate lipid homeostasis during sexual maturation, linking endocrine function to lipid transport gene expression.

bioRxiv · Jun 11, 2021 · PreprintPhysiology

Characterization of hormone-producing cell types in the teleost pituitary gland using single-cell RNA-seq

K. Siddique, E. Ager-Wick, R. Fontaine, F.-A. Weltzien, C. Henkel

The paper uses single-cell RNA-seq to characterize hormone-producing cell types in the pituitary gland of medaka fish, identifying 15 and 16 distinct cell types in females and males, respectively.

bioRxiv · Dec 14, 2020 · PreprintPhysiology