Author

D. Gomez-Cabrero

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 3 Cell Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 5 Organism:human· 4 Assay:scRNA-seq· 4 Approach:statistical model· 4 Research Focus:gene regulatory network inference· 3 Assay:ATAC-seq· 2 Approach:deep learning· 2 Research Focus:differential expression· 2

Frequent Co-Authors

A. Vilas-Zornoza· 4 shared F. Prosper· 4 shared D. Alignani· 3 shared P. San Martin-Uriz· 3 shared D. Lara-Astiaso· 2 shared J. I. Martin-Subero· 2 shared J. P. Romero· 2 shared J. Tegner· 2 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 44 mutual co-author links

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4 shared papersImmunology

A. Vilas-Zornoza

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Uncovering the regulatory landscape of early human B-cell lymphopoiesis and its implications in the pathogenesis of B-cell acute lymphoblastic leukemia

N. Planell, X. Martinez-de-Morentin, D. Mouzo, D. Lara-Astiaso, A. Vilas-Zornoza, P. San Martin-Uriz, D. Alignani, B. Paiva, A. Maillo, A. Kurowska, N. Berastegui, P. Garcia-Olloqui, A. Urdangarin, P. Noori, A. Ortega-Legarreta, , D. Gomez-Cabrero

This study characterizes the gene regulatory network of early human B-cell development and identifies regulatory elements linked to B-cell acute lymphoblastic leukemia.

bioRxiv · Jul 1, 2023 · PreprintImmunology

An Atlas of Cells in the Human Tonsil

R. Massoni-Badosa, P. Soler-Vila, S. Aguilar-Fernandez, J. C. Nieto, M. Elosua-Bayes, D. Marchese, M. Kulis, A. Vilas-Zornoza, M. M. Bühler, S. Rashmi, C. Alsinet, G. Caratu, C. Moutinho, S. Ruiz, P. Lorden, , H. Heyn

The paper creates a comprehensive cell atlas of the human tonsil using single-cell multi-omics data, identifying 121 cell types and uncovering regulatory mechanisms and disease-related changes.

bioRxiv · Jun 24, 2022Immunology

Deep deconvolution of the hematopoietic stem cell regulatory microenvironment reveals a high degree of specialization and conservation between mouse and human.

J. Ye, I. A. Calvo, I. Cenzano, A. Vilas-Zornoza, X. Martinez-de-Morentin, M. Lasaga, D. Alignani, B. Pavia, A. C. Vinado, P. San Martin-Uriz, J. P. Romero, D. Quilez Agreda, M. MinanaBarrios, I. Sancho-Gonzalez, G. Todisco, , D. Gomez-Cabrero

The paper develops a bioinformatic pipeline to analyze scRNA-seq data and identifies intermediate cell states and differentiation stages in the hematopoietic stem cell regulatory microenvironment, revealing conservation between mouse and human.

bioRxiv · Jul 17, 2021 · PreprintImmunology

Abundance and diversity of resistomes differ between healthy human oral cavities and gut

V. R. Carr, E. Witherden, S. Lee, S. Shoaie, P. Mullany, G. B. Proctor, D. Gomez-Cabrero, D. L. Moyes

This study compares antimicrobial resistance gene abundance and diversity in human oral cavities and gut samples globally, finding distinct resistome profiles and lower oral diversity.

bioRxiv · Sep 19, 2019Microbiology

Single-cell RNA-seq analysis reveals the crucial role of Collagen Triplex Helix Repeat Containing 1 (CTHRC1) cardiac fibroblasts for ventricular remodeling after myocardial infarction

A. Ruiz-Villalba, J. P. Romero, S. C. Hernandez, A. Vilas-Zornoza, N. Fortelny, L. Castro, P. San Martin-Uriz, E. Lorenzo-Vivas, P. Garcia-Olloqui, M. Palacios, J. J. Gavira, G. Bastarrika, S. Janssens, E. Iglesias, G. Abizanda, , F. Prosper

This study identifies a pro-fibrotic fibroblast subpopulation in mice after myocardial infarction, showing CTHRC1's role in ventricular remodeling and cardiac function.

bioRxiv · May 20, 2019Cell Biology