Author

D. Shoemark

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biochemistry· 1 Cell Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Organism:virus· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1

Frequent Co-Authors

A. D. Davidson· 2 shared A. A. Ibarra· 1 shared A. J. Mulholland· 1 shared A. S. Oliveira· 1 shared C. Schaffitzel· 1 shared D. A. Matthews· 1 shared I. Berger· 1 shared J. A. Hiscox· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiochemistry

A. D. Davidson

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

The fatty acid site is coupled to functional motifs in the SARS-CoV-2 spike protein and modulates spike allosteric behaviour

A. S. Oliveira, D. Shoemark, A. A. Ibarra, A. D. Davidson, I. Berger, C. Schaffitzel, A. J. Mulholland

This study uses molecular dynamics simulations to show that the fatty acid binding site in the SARS-CoV-2 spike protein influences distant functional regions and variant behavior.

Computational and Structural Biotechnology Journal · Dec 11, 2021Peer-reviewedBiochemistry

Characterisation of the transcriptome and proteome of SARS-CoV-2 using direct RNA sequencing and tandem mass spectrometry reveals evidence for a cell passage induced in-frame deletion in the spike glycoprotein that removes the furin-like cleavage site

A. D. Davidson, M. Kavangh Williamson, S. Lewis, D. Shoemark, M. W. Carroll, K. Heesom, M. Zambon, J. Ellis, P. A. Lewis, J. A. Hiscox, D. A. Matthews

bioRxiv · Mar 22, 2020Microbiology

LIR-dependent LMX1A/LMX1B autophagy crosstalk shapes human midbrain dopaminergic neuronal resilience

J. D. Lane, N. Jimenez-Moreno, P. Stathakos, Z. Anton, D. Shoemark, R. Sessions, R. Witzgall, M. Caldwell

This study shows LMX1A and LMX1B regulate autophagy in human midbrain dopaminergic neurons through LIR interactions, affecting mitochondrial function and resilience to rotenone toxicity.

bioRxiv · May 14, 2019 · PreprintCell Biology