Author

Dan Averbuj

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Alexander Eckehart UrbaniD· 2 shared Alexej S. AbyzoviD· 2 shared Alice Lee· 2 shared Alison R. BartoniD· 2 shared Alissa M. D’GamaiD· 2 shared Alon GaloriD· 2 shared Andrew E. JaffeiD· 2 shared Andrew J. ChessiD· 2 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Alexander Eckehart UrbanORCID

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2 papers

Recent·Most cited

DeepMosaic: Control-independent mosaic single nucleotide variant detection using deep convolutional neural networks

Xiaoxu Yang, Xin Xu, Martin W. Breuss, Danny Antaki, Laurel Ball, Changuk Chung, Jiawei Shen, Chen Li, Renee D. George, Yifan Wang, Taejeong Bae, Yuhe Cheng, Alexej S. Abyzov, Liping Wei, Ludmil B. Alexandrov, , Sarah B. Emery

DeepMosaic detects mosaic single nucleotide variants without control samples using deep convolutional neural networks, achieving high accuracy and uncovering many variants missed by existing methods.

Nature Biotechnology · Jan 2, 2023Peer-reviewedGenomics

Somatic mosaicism in the mature brain reveals clonal cellular distributions during cortical development

Martin W. Breuss, Xiaoxu Yang, Johannes C. M. Schlachetzki, Danny Antaki, Addison J. Lana, Xin Xu, Changuk Chung, Guoliang Chai, Valentina Stanley, Qiong Song, Traci Fang Newmeyer, An Nguyen, Sydney O’Brien, Marten A. Hoeksema, Beibei Cao, , Xiaowei Zhu

The paper evaluates brain somatic mosaicism in the adult human to identify rules governing cellular distribution during embryogenesis.

Nature · Apr 20, 2022Peer-reviewedGenomics