Author

Daniel J Wilson

Primary ORCID profile (0000-0002-0940-3311 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Daniel J WilsoniD1 paper · University of Oxford

Biology Disciplines

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Genomics· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 3 Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Andrew KasarskisiD· 2 shared Derrick W Crook· 2 shared Louise J Pankhurst· 2 shared Luke W Anson· 2 shared Robert SebraiD· 2 shared A Sarah Walker· 1 shared A. Sarah Walker· 1 shared Adam Giess· 1 shared

Activity by Year

2015-2016 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersMicrobiology

Andrew KasarskisORCID

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3 papers

Recent·Most cited

Nested Russian Doll-like Genetic Mobility Drives Rapid Dissemination of the Carbapenem Resistance Gene blaKPC

Anna E Sheppard, Nicole Stoesser, Daniel J Wilson, Robert Sebra, Andrew Kasarskis, Luke W Anson, Adam Giess, Louise J Pankhurst, Alison Vaughan, Christopher J Grim, Heather L Cox, Anthony J Yeh, the Modernising Medical Microbiology (MMM) Informa, Costi D Sifri, A. Sarah Walker, , Amy J Mathers

This paper tracks the rapid spread of the blaKPC resistance gene in a hospital over five years, revealing nested genetic mobility mechanisms that enable dissemination across species and plasmids.

Antimicrobial Agents and Chemotherapy · Jun 1, 2016Peer-reviewedMicrobiology

Rapid antibiotic resistance predictions from genome sequence data for S. aureus and M. tuberculosis.

Phelim Bradley, N Claire Gordon, Timothy M Walker, Laura Dunn, Simon Heys, Bill Huang, Sarah Earle, Louise J Pankhurst, Luke Anson, Mariateresa de Cesare, Paolo Piazza, Antonina A Votintseva, Tanya Golubchik, Daniel J Wilson, David H Wyllie, , Zamin Iqbal

This paper develops a tool to predict antibiotic resistance in S. aureus and M. tuberculosis from genome sequences with high accuracy and speed.

Nature Communications · Dec 21, 2015Peer-reviewedGenomics

Evolutionary history of the global emergence of the Escherichia coli epidemic clone ST131

Nicole Stoesser, Anna Sheppard, Louise Pankhurst, Nicola de Maio, Catrin E Moore, Robert Sebra, Paul Turner, Luke W Anson, Andrew Kasarskis, Elizabeth M Batty, Veronica Kos, Daniel J Wilson, Rattanaphone Phetsouvanh, David Wyllie, Evgeni Sokurenko, , Modernising Medical Microbiology Informatics Group

This study traces the evolutionary history of the ST131 E. coli lineage, showing its clonal expansion linked to antibiotic use and plasmid acquisition, with implications for antimicrobial resistance control.

bioRxiv · Nov 6, 2015Genomics