Author

Daniel R. Caffrey

University of Massachusetts Chan Medical School

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Immunology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Organism:mouse· 1 Assay:proteomics· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Christine Lawrence· 1 shared Dario A. Cruz· 1 shared Douglas Taylor GolenbockiD· 1 shared Evelyn A. Kurt‐JonesiD· 1 shared Hualin Simon XiiD· 1 shared Jason D. HughesiD· 1 shared Katherine A. FitzgeraldiD· 1 shared Leandro de Souza Silva· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Christine Lawrence

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Cellular nucleic acid-binding protein (CNBP) dependent cytokine programming shapes host defense against Plasmodium infection

Romana Rashid, Leandro de Souza Silva, Shahid Banday, Daniel R. Caffrey, Evelyn A. Kurt‐Jones, Katherine A. Fitzgerald, Douglas Taylor Golenbock

This study identifies CNBP's role in regulating the IL12β-IFN-γ axis during Plasmodium infection, showing its importance in immune control and potential as a therapeutic target.

bioRxiv · Jun 3, 2026 · PreprintImmunology

PFRED: A computational platform for siRNA and antisense oligonucleotides design.

Simone Sciabola, Hualin Simon Xi, Dario A. Cruz, Qing Na Cao, Christine Lawrence, Tianhong Zhang, Sergio H. Rotstein, Jason D. Hughes, Daniel R. Caffrey, Robert V. Stanton

PFRED is a software tool for designing and analyzing antisense oligonucleotides and siRNA, offering customizable design criteria and open-source access.

PLoS ONE · Jan 22, 2021Peer-reviewedBioinformatics