Multi-resolution deconvolution of spatial transcriptomics data reveals continuous patterns of inflammation
Romain Lopez, Baoguo Li, Hadas Keren‐Shaul, Pierre Boyeau, Merav Kedmi, David Pilzer, Adam Jelinski, Ido Yofe, Eyal David, Allon Wagner, Can Ergen, Yoseph Addadi, Ofra Golani, Franca Ronchese, Michael I. Jordan, , Nir Yosef
The paper introduces DestVI, a method for multi-resolution spatial transcriptomics analysis that captures continuous cell state variation, and applies it to study inflammation in lymph nodes and tumors.
Nature Biotechnology · Apr 21, 2022Peer-reviewedBioinformatics